Data on mass spectrometry based identification of allergens from sunflower (Helianthus annuus L.) pollen proteome

AbstractAllergy is a type of abnormal immune reactions, which is triggered by environmental antigens or allergens and mediated by IgE antibodies. Now-a-days mass spectrometry is the method of choice for allergen identification based on homology searching. Here, we provide the mass spectrometry dataset associated with our previously published research article on identification of sunflower pollen allergens (Ghosh et al., 2015 [1]). In this study allergenicity of sunflower (Helianthus annuus) pollen grains were primarily investigated by clinical studies followed by detailed immunobiochemical and immunoproteomic analyses. The mass spectrometry data for the identification of allergens were deposited to ProteomeXchange Consortium via PRIDE partner repository with the dataset identifier http://www.ebi.ac.uk/pride/archive/projects/PXD002397

Vortices and the mixed state of ultrathin Bi films

Current-voltage (I-V) characteristics of quench condensed, superconducting, ultrathin Bi films in a magnetic field are reported. These show hysteresis for all films, grown both with and without thin Ge underlayers. Films on Ge underlayers, close to superconductor-insulator transition, show a peak in the critical current, indicating a structural transformation of the vortex solid. These underlayers, used to make the films more homogeneous, are found to be more effective in pinning the vortices. The upper critical fields ($B_{c2}$) of these films are determined from the resistive transitions in perpendicular magnetic field. The temperature dependence of the upper critical field is found to differ significantly from Ginzburg-Landau theory, after modifications for disorder.Comment: Submitted to LT23 Proceeding

Stress causing dynamic changes of four phytohormones in tobacco and tomato: A GC-MS analysis

Many analytical procedures have been developed to determine the importance of phytohormones in different plants. The work reported here provides a sensitive, accurate and readily accessible gas chromatography coupled to mass spectrometry (GC-MS) technique designed for the simultaneous quantitation of phytohormones indole-3-aceticacid (IAA), abscisic acid (ABA), jasmonic acid (JA) and salicylic acid (SA). These signalling molecules were analysed in two different plants, Tomato and Tobacco grown in vitro. The protocol designed to assess the dynamic changes in endogenous concentrations of hormones to study plant responses to abiotic stresses in leaf tissues. A hormone profiling is obtained from leaves of plants exposed to salt stress show that different plant hormones are involved in diverse physiologicsl processes. Crosstalk between these hormones result in synergetic or antagonic interactions which have important roles to play in abiotic stress response

Allergenicity Assessment of Allium sativum Leaf Agglutinin, a Potential Candidate Protein for Developing Sap Sucking Insect Resistant Food Crops

Background: Mannose-binding Allium sativum leaf agglutinin (ASAL) is highly antinutritional and toxic to various phloem-feeding hemipteran insects. ASAL has been expressed in a number of agriculturally important crops to develop resistance against those insects. Awareness of the safety aspect of ASAL is absolutely essential for developing ASAL transgenic plants. Methodology/Principal Findings: Following the guidelines framed by the Food and Agriculture Organization/World Health Organization, the source of the gene, its sequence homology with potent allergens, clinical tests on mammalian systems, and the pepsin resistance and thermostability of the protein were considered to address the issue. No significant homology to the ASAL sequence was detected when compared to known allergenic proteins. The ELISA of blood sera collected from known allergy patients also failed to show significant evidence of cross-reactivity. In vitro and in vivo assays both indicated the digestibility of ASAL in the presence of pepsin in a minimum time period. Conclusions/Significance: With these experiments, we concluded that ASAL does not possess any apparent features of an allergen. This is the first report regarding the monitoring of the allergenicity of any mannose-binding monocot lectin having insecticidal efficacy against hemipteran insects

STATUS OF SERUM MAGNESIUM, ZINC & COPPER IN PATIENTS SUFFERING FROM TYPE -2 DIABETES MELLITUS

Alterations in serum concentrations of several trace elements including copper, zinc, manganese, and the macroelement magnesium have been reported to occur in type-2 diabetes mellitus. This study is done to evaluate copper, zinc and magnesium status in diabetic and nondiabetic human subjects. In this comparative analysis, the serum concentration of copper, zinc and magnesium was estimated in 60 patients with type 2 diabetes mellitus without complication and 40 healthy non-diabetic subjects.  The data was analyzed by students’t’ test and Pearson’s correlation coefficient test.Mean serum concentration of copper was significantly elevated in diabetic patients compared to control subjects.  Serum zinc levels were significantly low (p < 0.001) in diabetic subjects compared to controls . There were no significant differences in serum magnesium between groups. Fasting plasma glucose level has significant positive correlation with serum level of copper (r = 0.567; p < 0.001), while zinc has negative correlation (r = -0.311; p < 0.047), but there is no significant correlation of plasma glucose level with serum magnesium level. Diabetic patients have signiï¬cantly lower mean serum zinc levels and significantly higher serum copper concentration compared with healthy controls respectively. Along with antidiabetic therapy, supplementation of zinc and magnesium and chelation of copper can red

Current glimpse of airborne allergenic pollen in Indian subcontinent

Respiratory allergic diseases such as bronchial asthma, rhinitis, urticaria, atopic dermatitis have been steadily increasing all over the world, including India. Owing to its alarming trend, several aerobiological surveys have been undertaken in different parts of India to delineate the variety of pollen and spore load. In this review, we have reported the current state of aerobiological knowladge in India with particular reference to allergenic airborn pollen occurence in 2001–2015. Pollen have been found to contribute a significant proportion in the air and caused allergy symptoms in the local inhabitants. Aerobiological records, a questionnaire survey and hospitalization records have been employed for the analysis. Holoptelea integrifolia, Amaranthus spinosus in northern region, Sorghum vulgare, Pennisetum, Gynandropsis gynandra, Parthenium hysterophorus, Dolichandrone platycalyx in southern regions, and Parthenium hysterophorus from the western region; Cynodon dactylon, Cenchrus ciliaris in the central area; Acacia auriculiformis, Cleome gynandra, Catharanthus roseus, Phoenix sylvestris, Areca catechu, and Lantana camara in the eastern regions as potential aeroallergens in India. The statistical approach confirmed the correlation between hospitalization rate associated with allergy-related health troubles and the prevalent allergenic pollen in the air. The Poaceae group has been found to be dominant throughout India. Immuno-biochemical studies identified various protein with allergenic potential found in the pollen recorded. Epitope identification and homology of the major allergenic protein Cat r1 of Catharanthus sp and Par j 1 of Parietaria judaica have been found. Identification of allergenic pollen grains and the modern approach concerning cross-reactivity and epitope revelation of dominant airborne pollen have important clinical implications for the prevention, diagnosis and treatments of allergic diseases in India

Biomonitoring of pollen grains of a river bank suburban city, Konnagar, Calcutta, India, and its link and impact on local people

Introduction and objectives. Pollen grains released by plants are dispersed into the air and can become trapped in human nasal mucosa, causing immediate release of allergens triggering severe Type 1 hypersensitivity reactions in susceptible allergic patients. Recent epidemiologic data show that 11–12% of people suffer from this type of disorders in India. Hence, it is important to examine whether pollen grains have a role in dissipating respiratory problems, including allergy and astma, in a subtropical suburban city. Materials and methods. Meteorological data were collected for a period of two years, together with aerobiological sampling with a Burkard sampler. A pollen calendar was prepared for the city. A health survey and the hospitalization rate of local people for the above problems were documented following statistical analysis between pollen counts and the data from the two above-mentioned sources. Skin Prick Test and Indirect ELISA were performer for the identification of allergenic pollen grains. Results. Bio-monitoring results showed that a total of 36 species of pollen grains were located in the air of the study area, where their presence is controlled by many important meteorological parameters proved from SPSS statistical analysis and by their blooming periods. Statistical analysis showed that there is a high positive correlation of monthly pollen counts with the data from the survey and hospital. Biochemical tests revealed the allergic nature of pollen grains of many local species found in the sampler. Conclusions. Bio-monitoring, together with statistical and biochemical results, leave no doubt about the role of pollen as a bio-pollutant. General knowledge about pollen allergy and specific allergenic pollen grains of a particular locality could be a good step towards better health for the cosmopolitan suburban city