Ground state wavefunction of the quantum Frenkel-Kontorova model

The wavefunction of an incommensurate ground state for a one-dimensional discrete sine-Gordon model -- the Frenkel-Kontorova (FK) model -- at zero temperature is calculated by the quantum Monte Carlo method. It is found that the ground state wavefunction crosses over from an extended state to a localized state when the coupling constant exceeds a certain critical value. So, although the quantum fluctuation has smeared out the breaking of analyticity transition as observed in the classical case, the remnant of this transition is still discernible in the quantum regime.Comment: 5 Europhys pages, 3 EPS figures, accepted for publication in Europhys. Letter

Population Connectivity of Pelagic Megafauna in the Cuba-Mexico-United States Triangle

The timing and extent of international crossings by billfishes, tunas, and sharks in the Cuba-Mexico-United States (U.S.) triangle was investigated using electronic tagging data from eight species that resulted in \u3e22,000 tracking days. Transnational movements of these highly mobile marine predators were pronounced with varying levels of bi- or tri-national population connectivity displayed by each species. Billfishes and tunas moved throughout the Gulf of Mexico and all species investigated (blue marlin, white marlin, Atlantic bluefin tuna, yellowfin tuna) frequently crossed international boundaries and entered the territorial waters of Cuba and/or Mexico. Certain sharks (tiger shark, scalloped hammerhead) displayed prolonged periods of residency in U.S. waters with more limited displacements, while whale sharks and to a lesser degree shortfin mako moved through multiple jurisdictions. The spatial extent of associated movements was generally associated with their differential use of coastal and open ocean pelagic ecosystems. Species with the majority of daily positions in oceanic waters off the continental shelf showed the greatest tendency for transnational movements and typically traveled farther from initial tagging locations. Several species converged on a common seasonal movement pattern between territorial waters of the U.S. (summer) and Mexico (winter)

The Effect of Structural Complexity, Prey Density, and “Predator-Free Space” on Prey Survivorship at Created Oyster Reef Mesocosms

Interactions between predators and their prey are influenced by the habitat they occupy. Using created oyster (Crassostrea virginica) reef mesocosms, we conducted a series of laboratory experiments that created structure and manipulated complexity as well as prey density and “predator-free space” to examine the relationship between structural complexity and prey survivorship. Specifically, volume and spatial arrangement of oysters as well as prey density were manipulated, and the survivorship of prey (grass shrimp, Palaemonetes pugio) in the presence of a predator (wild red drum, Sciaenops ocellatus) was quantified. We found that the presence of structure increased prey survivorship, and that increasing complexity of this structure further increased survivorship, but only to a point. This agrees with the theory that structural complexity may influence predator-prey dynamics, but that a threshold exists with diminishing returns. These results held true even when prey density was scaled to structural complexity, or the amount of “predator-free space” was manipulated within our created reef mesocosms. The presence of structure and its complexity (oyster shell volume) were more important in facilitating prey survivorship than perceived refugia or density-dependent prey effects. A more accurate indicator of refugia might require “predator-free space” measures that also account for the available area within the structure itself (i.e., volume) and not just on the surface of a structure. Creating experiments that better mimic natural conditions and test a wider range of “predator-free space” are suggested to better understand the role of structural complexity in oyster reefs and other complex habitats

An empirical test of the ‘shark nursery area concept’ in Texas bays using a long-term fisheries-independent data set

Using a long-term fisheries-independent data set, we tested the ‘shark nursery area concept’ proposed by Heupel et al. (2007) with the suggested working assumptions that a shark nursery habitat would: (1) have an abundance of immature sharks greater than the mean abundance across all habitats where they occur; (2) be used by sharks repeatedly through time (years); and (3) see immature sharks remaining within the habitat for extended periods of time. We tested this concept using young-of-the-year (age 0) and juvenile (age 1+ yr) bull sharks Carcharhinus leucas from gill-net surveys conducted in Texas bays from 1976 to 2006 to estimate the potential nursery function of 9 coastal bays. Of the 9 bay systems considered as potential nursery habitat, only Matagorda Bay satisfied all 3 criteria for young-of-the-year bull sharks. Both Matagorda and San Antonio Bays met the criteria for juvenile bull sharks. Through these analyses we examined the utility of this approach for characterizing nursery areas and we also describe some practical considerations, such as the influence of the temporal or spatial scales considered when applying the nursery role concept to shark populations.Publishe

Diel vertical habitat use observations of a scalloped hammerhead and a bigeye thresher in the northern Gulf of Mexico

Understanding habitat use of elasmobranchs in pelagic environments is complicated due to the mobility of these large animals and their ability to move great distances in a three-dimensional environment. The Gulf of Mexico is a region where many highly migratory pelagic shark species occur, while in close proximity to coastal, anthropogenic activity including recreational and commercial fisheries. This study provides summary information on the vertical habitat use for a single male scalloped hammerhead and a single male bigeye thresher that were each caught and tagged with an archiving satellite tag. The scalloped hammerhead occupied shallow depths (350 m) during the day, then occupying shallower depths (50–100 m) during the night. By providing summary information, this note urges future research to provide scientific information on pelagic, highly migratory species for management efforts in the Gulf of Mexico region

CD40 Signaling in Mice Elicits a Broad Antiviral Response Early during Acute Infection with RNA Viruses

Macrophages are critical in the pathogenesis of a diverse group of viral pathogens, both as targets of infection and for eliciting primary defense mechanisms. Our prior in vitro work identified that CD40 signaling in murine peritoneal macrophages protects against several RNA viruses by eliciting IL-12, which stimulates the production of interferon gamma (IFN-γ). Here, we examine the role of CD40 signaling in vivo. We show that CD40 signaling is a critical, but currently poorly appreciated, component of the innate immune response using two distinct infectious agents: mouse-adapted influenza A virus (IAV, PR8) and recombinant VSV encoding the Ebola virus glycoprotein (rVSV-EBOV GP). We find that stimulation of CD40 signaling decreases early IAV titers, whereas loss of CD40 elevated early titers and compromised lung function by day 3 of infection. Protection conferred by CD40 signaling against IAV is dependent on IFN-γ production, consistent with our in vitro studies. Using rVSV-EBOV GP that serves as a low-biocontainment model of filovirus infection, we demonstrate that macrophages are a CD40-expressing population critical for protection within the peritoneum and T-cells are the key source of CD40L (CD154). These experiments reveal the in vivo mechanisms by which CD40 signaling in macrophages regulates the early host responses to RNA virus infection and highlight how CD40 agonists currently under investigation for clinical use may function as a novel class of broad antiviral treatments