160 research outputs found
MRI radiomic features are independently associated with overall survival in soft tissue sarcoma
Purpose: Soft tissue sarcomas (STS) represent a heterogeneous group of diseases, and selection of individualized treatments remains a challenge. The goal of this study was to determine whether radiomic features extracted from magnetic resonance (MR) images are independently associated with overall survival (OS) in STS.
Methods and Materials: This study analyzed 2 independent cohorts of adult patients with stage II-III STS treated at center 1 (N = 165) and center 2 (N = 61). Thirty radiomic features were extracted from pretreatment T1-weighted contrast-enhanced MR images. Prognostic models for OS were derived on the center 1 cohort and validated on the center 2 cohort. Clinical-only (C), radiomics-only (R), and clinical and radiomics (C+R) penalized Cox models were constructed. Model performance was assessed using Harrell\u27s concordance index.
Results: In the R model, tumor volume (hazard ratio [HR], 1.5) and 4 texture features (HR, 1.1-1.5) were selected. In the C+R model, both age (HR, 1.4) and grade (HR, 1.7) were selected along with 5 radiomic features. The adjusted c-indices of the 3 models ranged from 0.68 (C) to 0.74 (C+R) in the derivation cohort and 0.68 (R) to 0.78 (C+R) in the validation cohort. The radiomic features were independently associated with OS in the validation cohort after accounting for age and grade (HR, 2.4;
Conclusions: This study found that radiomic features extracted from MR images are independently associated with OS when accounting for age and tumor grade. The overall predictive performance of 3-year OS using a model based on clinical and radiomic features was replicated in an independent cohort. Optimal models using clinical and radiomic features could improve personalized selection of therapy in patients with STS
Performance of a Neutron Polarimeter to Measure the Electric Form Factor of the Neutron
This research was sponsored by the National Science Foundation Grant NSF PHY-931478
Deeply virtual and exclusive electroproduction of omega mesons
The exclusive omega electroproduction off the proton was studied in a large
kinematical domain above the nucleon resonance region and for the highest
possible photon virtuality (Q2) with the 5.75 GeV beam at CEBAF and the CLAS
spectrometer. Cross sections were measured up to large values of the
four-momentum transfer (-t < 2.7 GeV2) to the proton. The contributions of the
interference terms sigma_TT and sigma_TL to the cross sections, as well as an
analysis of the omega spin density matrix, indicate that helicity is not
conserved in this process. The t-channel pi0 exchange, or more generally the
exchange of the associated Regge trajectory, seems to dominate the reaction
gamma* p -> omega p, even for Q2 as large as 5 GeV2. Contributions of handbag
diagrams, related to Generalized Parton Distributions in the nucleon, are
therefore difficult to extract for this process. Remarkably, the high-t
behaviour of the cross sections is nearly Q2-independent, which may be
interpreted as a coupling of the photon to a point-like object in this
kinematical limit.Comment: 15 pages,19 figure
Q^2 Dependence of the S_{11}(1535) Photocoupling and Evidence for a P-wave resonance in eta electroproduction
New cross sections for the reaction are reported for total
center of mass energy =1.5--2.3 GeV and invariant squared momentum transfer
=0.13--3.3 GeV. This large kinematic range allows extraction of new
information about response functions, photocouplings, and coupling
strengths of baryon resonances. A sharp structure is seen at 1.7 GeV.
The shape of the differential cross section is indicative of the presence of a
-wave resonance that persists to high . Improved values are derived for
the photon coupling amplitude for the (1535) resonance. The new data
greatly expands the range covered and an interpretation of all data with
a consistent parameterization is provided.Comment: 31 pages, 9 figure
Measurement of the Polarized Structure Function for in the Resonance Region
The polarized longitudinal-transverse structure function
has been measured using the reaction in the
resonance region at and 0.65 GeV. No previous
data exist for this reaction channel. The kinematically
complete experiment was performed at Jefferson Lab with the CEBAF Large
Acceptance Spectrometer (CLAS) using longitudinally polarized electrons at an
energy of 1.515 GeV. A partial wave analysis of the data shows generally better
agreement with recent phenomenological models of pion electroproduction
compared to the previously measured channel. A fit to both
and channels using a unitary isobar model suggests the unitarized
Born terms provide a consistent description of the non-resonant background. The
-channel pion pole term is important in the channel through a
rescattering correction, which could be model-dependent.Comment: 6 pages, LaTex, 5 eps figures: Submitted to PRC/Brief Reports v2:
Updated referenc
Dependence of Quadrupole Strength in the Transition
Models of baryon structure predict a small quadrupole deformation of the
nucleon due to residual tensor forces between quarks or distortions from the
pion cloud. Sensitivity to quark versus pion degrees of freedom occurs through
the dependence of the magnetic (), electric (), and
scalar () multipoles in the
transition. We report new experimental values for the ratios
and over the range = 0.4-1.8 GeV, extracted from
precision data using a truncated multipole expansion.
Results are best described by recent unitary models in which the pion cloud
plays a dominant role.Comment: 5 pages, 5 figures, 1 table. To be published in Phys. Rev. Lett.
(References, figures and table updated, minor changes.
The e p -> e' p eta reaction at and above the S11(1535) baryon resonance
New cross sections for the reaction e p -> ep eta are reported for total
center of mass energy W = 1.5--1.86 GeV and invariant momentum transfer Q^2 =
0.25--1.5 GeV^2. This large kinematic range allows extraction of important new
information about response functions, photocouplings, and eta N coupling
strengths of baryon resonances. Expanded W coverage shows sharp structure at W
\~ 1.7 GeV; this is shown to come from interference between S and P waves and
can be interpreted in terms of known resonances. Improved values are derived
for the photon coupling amplitude for the S11(1535) resonance.Comment: 11 pages, RevTeX, 5 figures, submitted to Phys. Rev. Let
Measurement of Inclusive Spin Structure Functions of the Deuteron
We report the results of a new measurement of spin structure functions of the
deuteron in the region of moderate momentum transfer ( = 0.27 -- 1.3
(GeV/c)) and final hadronic state mass in the nucleon resonance region (
= 1.08 -- 2.0 GeV). We scattered a 2.5 GeV polarized continuous electron beam
at Jefferson Lab off a dynamically polarized cryogenic solid state target
(ND) and detected the scattered electrons with the CEBAF Large
Acceptance Spectrometer (CLAS). From our data, we extract the longitudinal
double spin asymmetry and the spin structure function . Our
data are generally in reasonable agreement with existing data from SLAC where
they overlap, and they represent a substantial improvement in statistical
precision. We compare our results with expectations for resonance asymmetries
and extrapolated deep inelastic scaling results. Finally, we evaluate the first
moment of the structure function and study its approach to both the
deep inelastic limit at large and to the Gerasimov-Drell-Hearn sum rule
at the real photon limit (). We find that the first moment varies
rapidly in the range of our experiment and crosses zero at between
0.5 and 0.8 (GeV/c), indicating the importance of the resonance at
these momentum transfers.Comment: 13 pages, 8 figures, ReVTeX 4, final version as accepted by Phys.
Rev.
Experimental Oral Transmission of Chronic Wasting Disease to Reindeer (Rangifer tarandus tarandus)
Chronic wasting disease (CWD), a transmissible spongiform encephalopathy of cervids, remains prevalent in North American elk, white-tailed deer and mule deer. A natural case of CWD in reindeer (Rangifer tarandus tarandus) has not been reported despite potential habitat overlap with CWD-infected deer or elk herds. This study investigates the experimental transmission of CWD from elk or white-tailed deer to reindeer by the oral route of inoculation. Ante-mortem testing of the three reindeer exposed to CWD from white-tailed deer identified the accumulation of pathological PrP (PrPCWD) in the recto-anal mucosa associated lymphoid tissue (RAMALT) of two reindeer at 13.4 months post-inoculation. Terminal CWD occurred in the two RAMALT-positive reindeer at 18.5 and 20 months post-inoculation while one other reindeer in the white-tailed deer CWD inoculum group and none of the 3 reindeer exposed to elk CWD developed disease. Tissue distribution analysis of PrPCWD in CWD-affected reindeer revealed widespread deposition in central and peripheral nervous systems, lymphoreticular tissues, the gastrointestinal tract, neuroendocrine tissues and cardiac muscle. Analysis of prion protein gene (PRNP) sequences in the 6 reindeer identified polymorphisms at residues 2 (V/M), 129 (G/S), 138 (S/N) and 169 (V/M). These findings demonstrate that (i) a sub-population of reindeer are susceptible to CWD by oral inoculation implicating the potential for transmission to other Rangifer species, and (ii) certain reindeer PRNP polymorphisms may be protective against CWD infection
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