4,872 research outputs found
The air that we breathe: Respiratory morbidity in children with congenital pulmonary malformations
The air that we breathe: Respiratory morbidity in children with congenital pulmonary malformations
Resilience and Self-Reliance in Canadian Food Charter Discourse
This article interrogates the rhetoric of “self-reliance” as a common feature of discourses about individual and community resilience by examining Canadian food charters in the context of regional food systems aimed at improving community food security. Despite the association of food charters with alternative food systems and progressive politics, we find that their ambiguous and shifting appeals to self-reliance largely conflict with their stated social justice goals of community food security, particularly the goal of alleviating the distress of food insecurity for vulnerable community members. Overall, we argue that the rhetoric of self-reliance in Canadian food charters primarily perpetuates a neoliberal ideology of resilience that promotes an active, enterprising ethos of responsibility for one’s own well-being, whether at the level of individuals, communities, or food systems. Our study thus contributes to critical scholarship that contextualizes and problematizes specific sites and practices of resilience discourse
HECT ubiquitin ligases as accessory proteins of the plant proteasome
The proteasome plays vital roles in eukaryotic cells by orchestrating the regulated degradation of large repertoires of substrates involved in numerous biological processes. Proteasome dysfunction is associated with a wide variety of human pathologies and in plants severely affects growth, development and responses to stress. The activity of E3 ubiquitin ligases marks proteins fated for degradation with chains of the post-translational modifier, ubiquitin. Proteasomal processing of ubiquitinated substrates involves ubiquitin chain recognition, deubiquitination, ATP-mediated unfolding and translocation, and proteolytic digestion. This complex series of steps is made possible not only by the many specialised subunits of the 1.5 MDa proteasome complex but also by a range of accessory proteins that are recruited to the proteasome. A surprising class of accessory proteins are members of the HECT-type family of ubiquitin ligases that utilise a unique mechanism for post-translational attachment of ubiquitin to their substrates. So why do proteasomes that already contain all the necessary machinery to recognise ubiquitinated substrates, harbour HECT ligase activity? It is now clear that some ubiquitin ligases physically relay their substrates to proteasome-associated HECT ligases, which prevent substrate stalling at the proteasome. Moreover, HECT ligases ubiquitinate proteasome subunits, thereby modifying the proteasome’s ability to recognise substrates. They may therefore enable proteasomes to be both non-specific and extraordinarily selective in a complex substrate environment. Understanding the relationship between the proteasome and accessory HECT ligases will reveal how the proteasome controls so many diverse plant developmental and stress responses
Characterising plant deubiquitinases with in vitro activity-based labelling and ubiquitin chain disassembly assays
Post-translational modification of proteins by ubiquitin is an essential cellular signaling mechanism in all eukaryotes. Ubiquitin is removed from target proteins by a wide range of deubiquitinase (DUB) enzymes with different activities and substrate specificities. Understanding how DUBs function in vitro is a vital first step to uncovering their cellular roles. Here, we provide protocols for the rapid analysis of DUB activity in vitro by activity-based labelling with the suicide probe, HA-ubiquitin vinyl sulfone (HA-UbVS), and ubiquitin chain disassembly assays. We have previously used these methods to analyse the activity of the Arabidopsis thaliana DUB, UBP6, but in principle, these protocols are applicable to any DUB of interest
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