Coal-derived rates of atmospheric dust deposition during the Permian

Despite widespread evidence for atmospheric dust deposition prior to the Quaternary, quantitative rate data remains sparse. As dust influences both climate and biological productivity, the absence of quantitative dust data limits the comprehensiveness of models of pre-Quaternary climate and biogeochemical cycles. Here, we propose that inorganic matter contained in coal primarily records atmospheric dust deposition. To test this, we use the average concentration of inorganic matter in Permian coal to map global patterns and deposition rates of atmospheric dust over Pangea. The dust accumulation rate is calculated assuming Permian peat carbon accumulation rates in temperate climates were similar to Holocene rates and accounting for the loss of carbon during coalification. Coal-derived rates vary from 0.02 to 25 g m− 2 year− 1, values that fall within the present-day global range. A well-constrained East–West pattern of dust deposition corresponding to expected palaeoclimate gradients extends across Gondwana with maximum dust deposition rates occurring close to arid regions. A similar pattern is partially defined over the northern hemisphere. Patterns are consistent with the presence of two large global dust plumes centred on the tropics. The spatial patterns of dust deposition were also compared to dust cycle simulations for the Permian made with the Community Climate System Model version 3 (CCSM3). Key differences between the simulations and the coal data are the lack of evidence for an Antarctic dust source, higher than expected dust deposition over N and S China and greater dust deposition rates over Western Gondwana. This new coal-based dust accumulation rate data expands the pre-Neogene quantitative record of atmospheric dust and can help to inform and validate models of global circulation and biogeochemical cycles over the past 350 Myr

Detecting upland glaciation in Earth’s pre-Pleistocene record

Earth has sustained continental glaciation several times in its past. Because continental glaciers ground to low elevations, sedimentary records of ice contact can be preserved from regions that were below base level, or subject to subsidence. In such regions, glaciated pavements, ice-contact deposits such as glacial till with striated clasts, and glaciolacustrine or glaciomarine strata with dropstones reveal clear signs of former glaciation. But assessing upland (mountain) glaciation poses particular challenges because elevated regions typically erode, and thus have extraordinarily poor preservation potential. Here we propose approaches for detecting the former presence of glaciation in the absence or near-absence of ice-contact indicators; we apply this specifically to the problem of detecting upland glaciation, and consider the implications for Earth’s climate system. Where even piedmont regions are eroded, pro- and periglacial phenomena will constitute the primary record of upland glaciation. Striations on large (pebble and larger) clasts survive only a few km of fluvial transport, but microtextures developed on quartz sand survive longer distances of transport, and record high-stress fractures consistent with glaciation. Proglacial fluvial systems can be difficult to distinguish from non-glacial systems, but a preponderance of facies signaling abundant water and sediment, such as hyperconcentrated flood flows, non-cohesive fine-grained debris flows, and/or large-scale and coarse-grained cross-stratification are consistent with proglacial conditions, especially in combination with evidence for cold temperatures, such as rip-up clasts composed of noncohesive sediment, indicating frozen conditions, and/or evidence for a predominance of physical over chemical weathering. Other indicators of freezing (periglacial) conditions include frozen-ground phenomena such as fossil ice wedges and ice crystals. Voluminous loess deposits and eolian-marine silt/mudstone characterized by silt modes, a significant proportion of primary silicate minerals, and a provenance from non-silt precursors can indicate the operation of glacial grinding, even though such deposits may be far removed from the site(s) of glaciation. Ultimately, in the absence of unambiguous ice-contact indicators, inferences of glaciation must be grounded on an array of observations that together record abundant meltwater, temperatures capable of sustaining glaciation, and glacial weathering (e.g., glacial grinding). If such arguments are viable, they can bolster the accuracy of past climate models, and guide climate modelers in assessing the types of forcings that could enable glaciation at elevation, as well as the extent to which (extensive) upland glaciation might have influenced global climate.Ye

Atmospheric dust flux in northeastern Gondwana during the peak of the late Paleozoic ice age

The silicate mineral fraction of shallow marine carbonates archives dust contributions to the Central Persian Terranes along the northeastern margin of Gondwana (∼30°S paleolatitude), enabling reconstruction of atmospheric dust loading and circulation for intervals of the late Paleozoic ice age. The Central Persian Terranes hosted cyclic deposition of warm water carbonates from middle Pennsylvanian to earliest Permian time, and our data set includes two ∼28 m sections from the Moscovian and Asselian sampled at 20 cm intervals. Bounding surfaces between successive cycles (high-frequency sequences) are recognized by either abrupt basinward shifts in facies or subtle exposure features; these high-frequency sequences range from 1 m to 5 m thick and are interpreted to record glacioeustatic variations. Time series analysis of the dust fraction through the studied interval supports the hypothesis of orbital forcing for the dust signal. The stratigraphic pattern of the dust flux indicates minimal flux during interglacial highstands (0.19–0.27 g/cm2/kyr) and peak flux during glacial lowstands (3.77–4.57 g/cm2/kyr) after accounting for hiatal time at sequence boundaries. Grain size analysis of the dust for all samples (n = 230) reveals modal sizes (volume-based) of 1–15 µm through the Moscovian interval and 10–75 µm through the Asselian interval. Dust deposition increased during glacial times relative to interglacial times by a factor of 16 to 19. Additionally, the Asselian interval exhibits higher dust flux overall relative to the Moscovian interval, which is interpreted to reflect the more extreme icehouse conditions of the Asselian. Variation in the dust content through the studied sections provides an indicator of temporal changes in atmospheric loading that varied at both glacial–interglacial and higher-frequency (<104 yr) scales. Geochemical data reveal that the Arabian–Nubian Shield and southwestern Pangaea (South America) are the most likely sources of dust deposition in the Central Persian Terranes, with sources shifting during different phases. Increased dust flux during glacials likely reflects multiple factors, including enhanced aridity in the source region, exposure of shelf regions, and potential changes in winds. However, the discrepancy in model reconstructions of the amplitude of glacial–interglacial dust variations indicates that increased production of dust sourced by dynamic glaciation played a large role in enhancing dust flux during glacial phases.Research that contributed to the concepts presented here was funded by the National Science Foundation (EAR-1338331 and EAR-1337463 to G.S. Soreghan, EAR-1543518 to L.A. Hinnov, EAR-1337463 to N.G. Heavens, and EAR-1338440 to the University of Michigan). Supplementary funding was provided by the Eberly Family Chair (University of Oklahoma).Ye

Report on ICDP Deep Dust workshops: probing continental climate of the late Paleozoic icehouse–greenhouse transition and beyond

Chamberlin and Salisbury's assessment of the Permian a century ago captured the essence of the period: it is an interval of extremes yet one sufficiently recent to have affected a biosphere with near-modern complexity. The events of the Permian - the orogenic episodes, massive biospheric turnovers, both icehouse and greenhouse antitheses, and Mars-analog lithofacies - boggle the imagination and present us with great opportunities to explore Earth system behavior. The ICDP-funded workshops dubbed "Deep Dust," held in Oklahoma (USA) in March 2019 (67 participants from nine countries) and Paris (France) in January 2020 (33 participants from eight countries), focused on clarifying the scientific drivers and key sites for coring continuous sections of Permian continental (loess, lacustrine, and associated) strata that preserve high-resolution records. Combined, the two workshops hosted a total of 91 participants representing 14 countries, with broad expertise. Discussions at Deep Dust 1.0 (USA) focused on the primary research questions of paleoclimate, paleoenvironments, and paleoecology of icehouse collapse and the run-up to the Great Dying and both the modern and Permian deep microbial biosphere. Auxiliary science topics included tectonics, induced seismicity, geothermal energy, and planetary science. Deep Dust 1.0 also addressed site selection as well as scientific approaches, logistical challenges, and broader impacts and included a mid-workshop field trip to view the Permian of Oklahoma. Deep Dust 2.0 focused specifically on honing the European target. The Anadarko Basin (Oklahoma) and Paris Basin (France) represent the most promising initial targets to capture complete or near-complete stratigraphic coverage through continental successions that serve as reference points for western and eastern equatorial Pangaea. © 2020 Copernicus GmbH. All rights reserved

Report on ICDP Deep Dust workshops: probing continental climate of the late Paleozoic icehouse–greenhouse transition and beyond

Chamberlin and Salisbury's assessment of the Permian a century ago captured the essence of the period: it is an interval of extremes yet one sufficiently recent to have affected a biosphere with near-modern complexity. The events of the Permian - the orogenic episodes, massive biospheric turnovers, both icehouse and greenhouse antitheses, and Mars-analog lithofacies - boggle the imagination and present us with great opportunities to explore Earth system behavior. The ICDP-funded workshops dubbed "Deep Dust," held in Oklahoma (USA) in March 2019 (67 participants from nine countries) and Paris (France) in January 2020 (33 participants from eight countries), focused on clarifying the scientific drivers and key sites for coring continuous sections of Permian continental (loess, lacustrine, and associated) strata that preserve high-resolution records. Combined, the two workshops hosted a total of 91 participants representing 14 countries, with broad expertise. Discussions at Deep Dust 1.0 (USA) focused on the primary research questions of paleoclimate, paleoenvironments, and paleoecology of icehouse collapse and the run-up to the Great Dying and both the modern and Permian deep microbial biosphere. Auxiliary science topics included tectonics, induced seismicity, geothermal energy, and planetary science. Deep Dust 1.0 also addressed site selection as well as scientific approaches, logistical challenges, and broader impacts and included a mid-workshop field trip to view the Permian of Oklahoma. Deep Dust 2.0 focused specifically on honing the European target. The Anadarko Basin (Oklahoma) and Paris Basin (France) represent the most promising initial targets to capture complete or near-complete stratigraphic coverage through continental successions that serve as reference points for western and eastern equatorial Pangaea.This research has been supported by the ICDP (DeepDust2019 grant).Ye

Heterologous Amyloid Seeding: Revisiting the Role of Acetylcholinesterase in Alzheimer's Disease

Neurodegenerative diseases associated with abnormal protein folding and ordered aggregation require an initial trigger which may be infectious, inherited, post-inflammatory or idiopathic. Proteolytic cleavage to generate vulnerable precursors, such as amyloid-β peptide (Aβ) production via β and γ secretases in Alzheimer's Disease (AD), is one such trigger, but the proteolytic removal of these fragments is also aetiologically important. The levels of Aβ in the central nervous system are regulated by several catabolic proteases, including insulysin (IDE) and neprilysin (NEP). The known association of human acetylcholinesterase (hAChE) with pathological aggregates in AD together with its ability to increase Aβ fibrilization prompted us to search for proteolytic triggers that could enhance this process. The hAChE C-terminal domain (T40, AChE575-614) is an exposed amphiphilic α-helix involved in enzyme oligomerisation, but it also contains a conformational switch region (CSR) with high propensity for conversion to non-native (hidden) β-strand, a property associated with amyloidogenicity. A synthetic peptide (AChE586-599) encompassing the CSR region shares homology with Aβ and forms β-sheet amyloid fibrils. We investigated the influence of IDE and NEP proteolysis on the formation and degradation of relevant hAChE β-sheet species. By combining reverse-phase HPLC and mass spectrometry, we established that the enzyme digestion profiles on T40 versus AChE586-599, or versus Aβ, differed. Moreover, IDE digestion of T40 triggered the conformational switch from α- to β-structures, resulting in surfactant CSR species that self-assembled into amyloid fibril precursors (oligomers). Crucially, these CSR species significantly increased Aβ fibril formation both by seeding the energetically unfavorable formation of amyloid nuclei and by enhancing the rate of amyloid elongation. Hence, these results may offer an explanation for observations that implicate hAChE in the extent of Aβ deposition in the brain. Furthermore, this process of heterologous amyloid seeding by a proteolytic fragment from another protein may represent a previously underestimated pathological trigger, implying that the abundance of the major amyloidogenic species (Aβ in AD, for example) may not be the only important factor in neurodegeneration

Structural Elements Regulating Amyloidogenesis: A Cholinesterase Model System

Polymerization into amyloid fibrils is a crucial step in the pathogenesis of neurodegenerative syndromes. Amyloid assembly is governed by properties of the sequence backbone and specific side-chain interactions, since fibrils from unrelated sequences possess similar structures and morphologies. Therefore, characterization of the structural determinants driving amyloid aggregation is of fundamental importance. We investigated the forces involved in the amyloid assembly of a model peptide derived from the oligomerization domain of acetylcholinesterase (AChE), AChE586-599, through the effect of single point mutations on β-sheet propensity, conformation, fibrilization, surfactant activity, oligomerization and fibril morphology. AChE586-599 was chosen due to its fibrilization tractability and AChE involvement in Alzheimer's disease. The results revealed how specific regions and residues can control AChE586-599 assembly. Hydrophobic and/or aromatic residues were crucial for maintaining a high β-strand propensity, for the conformational transition to β-sheet, and for the first stage of aggregation. We also demonstrated that positively charged side-chains might be involved in electrostatic interactions, which could control the transition to β-sheet, the oligomerization and assembly stability. Further interactions were also found to participate in the assembly. We showed that some residues were important for AChE586-599 surfactant activity and that amyloid assembly might preferentially occur at an air-water interface. Consistently with the experimental observations and assembly models for other amyloid systems, we propose a model for AChE586-599 assembly in which a steric-zipper formed through specific interactions (hydrophobic, electrostatic, cation-π, SH-aromatic, metal chelation and polar-polar) would maintain the β-sheets together. We also propose that the stacking between the strands in the β-sheets along the fiber axis could be stabilized through π-π interactions and metal chelation. The dissection of the specific molecular recognition driving AChE586-599 amyloid assembly has provided further knowledge on such poorly understood and complicated process, which could be applied to protein folding and the targeting of amyloid diseases

ICDP workshop on the Lake Tanganyika Scientific Drilling Project: a late Miocene–present record of climate, rifting, and ecosystem evolution from the world's oldest tropical lake

The Neogene and Quaternary are characterized by enormous changes in global climate and environments, including global cooling and the establishment of northern high-latitude glaciers. These changes reshaped global ecosystems, including the emergence of tropical dry forests and savannahs that are found in Africa today, which in turn may have influenced the evolution of humans and their ancestors. However, despite decades of research we lack long, continuous, well-resolved records of tropical climate, ecosystem changes, and surface processes necessary to understand their interactions and influences on evolutionary processes. Lake Tanganyika, Africa, contains the most continuous, long continental climate record from the mid-Miocene (∼10 Ma) to the present anywhere in the tropics and has long been recognized as a top-priority site for scientific drilling. The lake is surrounded by the Miombo woodlands, part of the largest dry tropical biome on Earth. Lake Tanganyika also harbors incredibly diverse endemic biota and an entirely unexplored deep microbial biosphere, and it provides textbook examples of rift segmentation, fault behavior, and associated surface processes. To evaluate the interdisciplinary scientific opportunities that an ICDP drilling program at Lake Tanganyika could offer, more than 70 scientists representing 12 countries and a variety of scientific disciplines met in Dar es Salaam, Tanzania, in June 2019. The team developed key research objectives in basin evolution, source-to-sink sedimentology, organismal evolution, geomicrobiology, paleoclimatology, paleolimnology, terrestrial paleoecology, paleoanthropology, and geochronology to be addressed through scientific drilling on Lake Tanganyika. They also identified drilling targets and strategies, logistical challenges, and education and capacity building programs to be carried out through the project. Participants concluded that a drilling program at Lake Tanganyika would produce the first continuous Miocene–present record from the tropics, transforming our understanding of global environmental change, the environmental context of human origins in Africa, and providing a detailed window into the dynamics, tempo and mode of biological diversification and adaptive radiations.© Author(s) 2020. This open access article is distributed under the Creative Commons Attribution 4.0 License