15 research outputs found
Summary of predicted CAZymes in <i>P. sanguineus</i> transcriptome.
<p>Summary of predicted CAZymes in <i>P. sanguineus</i> transcriptome.</p
<i>P. sanguineus</i> putative copper radical oxidases.
a<p>Numbers in parentheses correspond to GenBank accession numbers for nucleotide sequences.</p>b<p>Numbers in parentheses correspond to GenBank accession numbers for amino acid sequences.</p
Reconstruction of terpenoid backbone biosynthesis pathway in <i>P. sanguineus</i>.
<p>Psang numbers inside boxes represent the IDs of transcripts encoding predicted enzymes involved in the biosynthesis of isopentenyl pyrophosphate via the mevalonate pathway, triterpenoid precursors and lanosterol. Numbers between brackets indicate the EC number of the corresponding enzyme. Dashed arrows indicate multiple steps.</p
<i>P. sanguineus</i> predicted genes involved in terpenoid biosynthesis.
a<p>Numbers in parentheses correspond to GenBank accession numbers for nucleotide sequences.</p>b<p><i>G. lucidum</i> orthologs IDs are according to published in <a href="http://www.plosone.org/article/info:doi/10.1371/journal.pone.0081033#pone.0081033-Liu1" target="_blank">[79]</a>.</p
Comparative GO annotation of the <i>P. sanguineus</i> transcriptome.
<p>GO terms assigned to 3,240 <i>P. sanguineus</i> transcripts were grouped into GO slim terms (x-axis) in the three main categories (Biological process, Cellular component, Molecular function) and compared to annotations for <i>T. versicolor</i> (6,464 genes) and <i>P. chrysosporium</i> (4,923 genes). The percentage of genes represents the number of genes of each category in reference to total genes.</p
<i>P. sanguineus</i> putative multicopper oxidases.
a<p>Numbers in parentheses correspond to GenBank accession numbers for nucleotide sequences.</p>b<p>Numbers in parentheses correspond to GenBank accession numbers for amino acid sequences.</p
<i>P. sanguineus</i> putative GMC oxidoreductases.
a<p>Numbers in parentheses correspond to GenBank accession numbers for nucleotide sequences.</p>b<p>Numbers in parentheses correspond to GenBank accession numbers for amino acid sequences.</p
Summary of <i>P. sanguineus</i> transcriptome assembly.
<p>Summary of <i>P. sanguineus</i> transcriptome assembly.</p
<i>P. sanguineus</i> putative peroxidases.
a<p>Numbers in parentheses correspond to GenBank accession numbers for nucleotide sequences.</p>b<p>Numbers in parentheses correspond to GenBank accession numbers for amino acid sequences.</p
Top hits distribution of BLASTx against custom database.
<p>Top hits distribution of BLASTx against custom database.</p