Phytophthora boodjera sp. nov., a damping-off pathogen in production nurseries and from urban and natural landscapes, with an update on the status of P. alticola

A new homothallic Phytophthora species, isolated in Western Australia (WA), is described as Phytophthora boodjera sp. nov. It produces persistent, papillate sporangia, oogonia with thick-walled oospores, and paragynous antheridia. Although morphologically similar to P. arenaria, phylogenetic analyses of the ITS, cox1, HSP90, β-tubulin and enolase gene regions revealed P. boodjera as a new species. In addition, P. boodjera has a higher optimal temperature for growth and a faster growth rate. Phytophthora boodjera has only recently been found in Western Australia and has mostly been isolated from dead and dying Eucalyptus seedlings in nurseries and from urban tree plantings, and occasionally from disturbed natural ecosystems. It is found in association with declining and dying Agonis flexuosa, Banksia media, B. grandis, Corymbia calophylla, Eucalyptus spp,. and Xanthorrhoea preissii. The status of P. alticola was also reviewed. The loss of all isolates associated with the original description except one; discrepancies in both sequence data and morphology of the remaining isolate with that presented the original description, and inconclusive holotype material places the status of this species in doubt

Age-related susceptibility of Eucalyptus species to Phytophthora boodjera

Phytophthora boodjera is a newly described pathogen causing damping off and mortality of Eucalyptus seedlings in Western Australian nurseries. This study evaluated the age-related susceptibility of several taxa of mallee Eucalyptus to P. boodjera in sterilized washed river sand-infestation pot trials. Phytophthora cinnamomi and P. arenaria were included for comparison. Seedlings of Eucalyptus taxa were inoculated at 0, 2, 4, 12 and 88 weeks with individual Phytophthora isolates. Pre-emergent mortality in the presence of Phytophthora was almost 100%. Post-emergent mortality was 50-100%, depending on isolate, compared to 0% for the control. Mortality was also high for inoculated 1 month-old seedlings (46-68%) and root length of surviving seedlings was severely reduced. Death from root infection was not observed for seedlings inoculated at 12 and 88 weeks, but they developed root necrosis and reduced root dry weight compared to non-inoculated controls. Phytophthora boodjera is a pre- and post-emergent pathogen of mallee eucalypts. These eucalypts are susceptible to P. boodjera at all life stages tested, but the mortality rates declined with plant age. Similar results were obtained for P. cinnamomi and P. arenaria. The events leading to its recent appearance in the nurseries remain unknown and further investigations are underway to determine if this is an introduced or endemic pathogen. The approach used here to understand the impact of a Phytophthora species on multiple hosts at different seedling ages is novel and sets a benchmark for future work

The description, pathogenicity and epidemiology of Phytophthora boodjera, a new nursery pathogen of Eucalyptus from Western Australia

When this study was commenced in November 2011, a recent outbreak of damping-off diasese in a Western Australia (WA) nursery had indicated the presence of a new Phytophthora species. Despite industry standard hygiene, the disease continued across years. The impact of this new disease in the nursery caused a great concern as the plants grown there were intended for environmental plantings and hence posed the risk of introducing a new species into the natural environment. This raised many questions to be cleared: (1) was this pathogen a new species, (2) was it only a damping-off pathogen or could it infect older seedlings or trees, (3) did it have a narrow or broad host range, (4) how did it get to the nursery and survive from year to year, (5) could it persist in environmental plantings, (6) was it endemic to Western Australia? This project addressed all of these questions. A new species, Phytophthora boodjera was described. It has a relatively narrow host range and is a pathogen of Eucalyptus. P. boodjera is especially a pre and postemergence damping-off pathogen with host susceptibility decreasing with age. Older seedlings and trees have damaged root systems but did not die. Within the nursery P. boodjera survived between seedings in the debris of the used trays. Immersion in 5% Calcium hypochlorite or using dry heat at 65oC for 2 hours did not eliminate the inoculum. Tracing of infected seedlings from the nursery showed that P. boodjera can persist in the natural environment if introduced. While common in nursery and recovered from urban planting, extensive sampling in natural ecosystems has recovered very few isolates of P. boodjera. Based on this low recovery and the high susceptibility of Eucalyptus species tested I conclude that P. boodjera is not endemic to WA

Phytophthora contamination in a nursery and its potential dispersal into the natural environment

A detailed site investigation of a eucalypt nursery suffering disease losses revealed the causal agent to be Phytophthora boodjera. The pathogen was detected in vegetation surrounding the nursery production area, including the lawn, under the production benches during the growing season, and, most importantly, from plant debris in used trays. However, it was not found in the container substrate, water supplies, or production equipment or on the workers themselves. The sterilization methods used by the nursery were shown to be ineffective, indicating that a more rigorous method was required. Boiling trays for 15 min or steaming at 65°C for 60 min eradicated P. boodjera. This pathogen was more pathogenic to the eucalypts tested in their early seedling stage than P. cinnamomi. Tracing of out-planting to revegetation sites showed that P. boodjera was able to spread into the environment. Dispersal via out-planting to native vegetation may affect seedling recruitment and drive long-term shifts in native plant species. Inadequate nursery hygiene increases the risk of an outbreak and can limit the success of biosecurity efforts as well as damage conservation efforts

New species from Phytophthora Clade 6a: evidence for recent radiation

During routine vegetation health surveys in the southwest of Western Australia (SWWA), several Phytophthora isolates with affinity to Clade 6a have been recovered. In this study, all known taxa from Clade 6a, P. inundata, P. humicola, P. gemini, P. ‘walnut’ and P. ‘personii’, and the new isolates were compared based on morphology and DNAsequence data from three nuclear genes and two mitochondrial genes resulting in the description of five new species, P. balyanboodja, P. condilina, P. cooljarloo, P. kwongonina and P. pseudorosacearum. With the exception of P. gemini and P. humicola, all species from Clade 6a have been recovered from natural ecosystems in SWWA. These species are morphologically similar, with predominantly ovoid sporangia and nested and extended internal proliferation. If oospores are present, they tend to be aplerotic with paragynous antheridia mostly attached adjacent to the oogonial stalk. They can all grow at 35 °C and have a fast growth rate on most agar media. These species have all been recovered from the rhizosphere soil and dead and dying plants within dry kwongon heathlands, often from water gaining sites and frequently from very isolated areas. The radiation, origin and potential ecological role of these species are discussed