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A multiomic analysis of in situ coral-turf algal interactions
Viruses, microbes, and host macroorganisms form ecological units called holobionts. Here, a combination of metagenomic sequenc- ing, metabolomic profiling, and epifluorescence microscopy was used to investigate how the different components of the hol- obiont including bacteria, viruses, and their associated metabolites mediate ecological interactions between corals and turf algae. The data demonstrate that there was a microbial assemblage unique to the coral -turf algae interface displaying higher microbial abun- dances and larger microbial cells. This was consistent with previ- ous studies showing that turf algae exudates feed interface and coral -associated microbial communities, often at the detriment of the coral. Further supporting this hypothesis, when the metabo- lites were assigned a nominal oxidation state of carbon (NOSC), we found that the turf algal metabolites were significantly more reduced (i.e., have higher potential energy) compared to the corals and interfaces. The algae feeding hypothesis was further sup- ported when the ecological outcomes of interactions (e.g., whether coral was winning or losing) were considered. For example, coral holobionts losing the competition with turf algae had higher Bacteroidetes-to-Firmicutes ratios and an elevated abundance of genes involved in bacterial growth and division. These changes were similar to trends observed in the obese human gut micro - biome, where overfeeding of the microbiome creates a dysbiosis detrimental to the long-term health of the metazoan host. Together these results show that there are specific biogeochemical changes at coral -turf algal interfaces that predict the competitive outcomes between holobionts and are consistent with algal exudates feeding coral -associated microbes