13,987 research outputs found
X(1576) and the Final State Interaction Effect
We study whether the broad peak X(1576) observed by BES Collaboration arises
from the final state interaction effect of decays. The
interference effect could produce an enhancement around 1540 MeV in the
spectrum with typical interference phases. However, the branching
ratio from the final state interaction effect is far less than the
experimental data.Comment: 6 pages, 4 figures. Some typos corrected, more discussion and
references adde
Image Deblurring and Super-resolution by Adaptive Sparse Domain Selection and Adaptive Regularization
As a powerful statistical image modeling technique, sparse representation has
been successfully used in various image restoration applications. The success
of sparse representation owes to the development of l1-norm optimization
techniques, and the fact that natural images are intrinsically sparse in some
domain. The image restoration quality largely depends on whether the employed
sparse domain can represent well the underlying image. Considering that the
contents can vary significantly across different images or different patches in
a single image, we propose to learn various sets of bases from a pre-collected
dataset of example image patches, and then for a given patch to be processed,
one set of bases are adaptively selected to characterize the local sparse
domain. We further introduce two adaptive regularization terms into the sparse
representation framework. First, a set of autoregressive (AR) models are
learned from the dataset of example image patches. The best fitted AR models to
a given patch are adaptively selected to regularize the image local structures.
Second, the image non-local self-similarity is introduced as another
regularization term. In addition, the sparsity regularization parameter is
adaptively estimated for better image restoration performance. Extensive
experiments on image deblurring and super-resolution validate that by using
adaptive sparse domain selection and adaptive regularization, the proposed
method achieves much better results than many state-of-the-art algorithms in
terms of both PSNR and visual perception.Comment: 35 pages. This paper is under review in IEEE TI
Protein complex detection with semi-supervised learning in protein interaction networks
<p>Abstract</p> <p>Background</p> <p>Protein-protein interactions (PPIs) play fundamental roles in nearly all biological processes. The systematic analysis of PPI networks can enable a great understanding of cellular organization, processes and function. In this paper, we investigate the problem of protein complex detection from noisy protein interaction data, i.e., finding the subsets of proteins that are closely coupled via protein interactions. However, protein complexes are likely to overlap and the interaction data are very noisy. It is a great challenge to effectively analyze the massive data for biologically meaningful protein complex detection.</p> <p>Results</p> <p>Many people try to solve the problem by using the traditional unsupervised graph clustering methods. Here, we stand from a different point of view, redefining the properties and features for protein complexes and designing a “semi-supervised” method to analyze the problem. In this paper, we utilize the neural network with the “semi-supervised” mechanism to detect the protein complexes. By retraining the neural network model recursively, we could find the optimized parameters for the model, in such a way we can successfully detect the protein complexes. The comparison results show that our algorithm could identify protein complexes that are missed by other methods. We also have shown that our method achieve better precision and recall rates for the identified protein complexes than other existing methods. In addition, the framework we proposed is easy to be extended in the future.</p> <p>Conclusions</p> <p>Using a weighted network to represent the protein interaction network is more appropriate than using a traditional unweighted network. In addition, integrating biological features and topological features to represent protein complexes is more meaningful than using dense subgraphs. Last, the “semi-supervised” learning model is a promising model to detect protein complexes with more biological and topological features available.</p
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