Molecular identification and genetic diversity analysis of sugarcane clones by SSR markers

Sugarcane is one of the important crops with high heterozygosity and phenotypic polymorphism. Varietal identification and characterization is one of the important aspects in any breeding programme. Forty sugarcane clones from Pre -zonal varietal trial (PZVT) conducted at Ugar, North Karnataka were characterized through Simple sequence repeats (SSR) markers using a set of 15 sugarcane specific primer pairs which amplified a total of 164 alleles with an average of 10.93 alleles per pair. Primer NKS 33 was highly polymorphic and produced more than 15 polymorphic alleles and was unique in all the clones studied. Six primers i.e., NKS 2, NKS 6, NKS 7, NKS 40, NKS 42 and NKS 11 were moderately polymorphic by producing 10 to 13 alleles. Percentage of polymorphic bands ranged from 75.0 % (NKS 3) to 100.0 % (NKS 40 and NKS 42). Primers viz., SMC 1039 GC, mSSCIR 54, NKS 2, NKS 7, NKS 9, NKS 33, NKS 40, NKS 42 and NKS 11 were highly informative and generated above 85.0 % of polymorphic bands. Among the primers used, SMC 1039 GC, NKS 33, NKS 42 and NKS 43 produced the maximum number of unique markers in different clones and hence the combined application of these primers will be useful in unambiguous varietal identification. The cluster analysis based on the genetic similarity matrix grouped the 40 clones into two major clusters CI and CII. The largest cluster CII contained the maximum of 38 clones. Cluster C II was further sub-grouped into IIa, IIb, IIc and IId and each sub-cluster comprised 7, 11, 6 and 14 clones respectively. The unique DNA markers and the genetically diverse combinations identified in the present study will enhance the exploitation of genetic diversity present in the clones in breeding programmes and promising twenty eight entries for yield and quality

An Intrusion Detection Using Machine Learning Algorithm Multi-Layer Perceptron (MlP): A Classification Enhancement in Wireless Sensor Network (WSN)

During several decades, there has been a meteoric rise in the development and use of cutting-edge technology. The Wireless Sensor Network (WSN) is a groundbreaking innovation that relies on a vast network of individual sensor nodes. The sensor nodes in the network are responsible for collecting data and uploading it to the cloud. When networks with little resources are deployed harshly and without regulation, security risks occur. Since the rate at which new information is being generated is increasing at an exponential rate, WSN communication has become the most challenging and complex aspect of the field. Therefore, WSNs are insecure because of this. With so much riding on WSN applications, accuracy in replies is paramount. Technology that can swiftly and continually analyse internet data streams is essential for spotting breaches and assaults. Without categorization, it is hard to simultaneously reduce processing time while maintaining a high level of detection accuracy. This paper proposed using a Multi-Layer Perceptron (MLP) to enhance the classification accuracy of a system. The proposed method utilises a feed-forward ANN model to generate a mapping for the training and testing datasets using backpropagation. Experiments are performed to determine how well the proposed MLP works. Then, the results are compared to those obtained by using the Hoeffding adaptive tree method and the Restricted Boltzmann Machine-based Clustered-Introduction Detection System. The proposed MLP achieves 98% accuracy, which is higher than the 96.33% achieved by the RBMC-IDS and the 97% accuracy achieved by the Hoeffding adaptive tree

Role of Sirtuins in Modulating Neurodegeneration of the Enteric Nervous System and Central Nervous System.

Neurodegeneration of the central and enteric nervous systems is a common feature of aging and aging-related diseases, and is accelerated in individuals with metabolic dysfunction including obesity and diabetes. The molecular mechanisms of neurodegeneration in both the CNS and ENS are overlapping. Sirtuins are an important family of histone deacetylases that are important for genome stability, cellular response to stress, and nutrient and hormone sensing. They are activated by calorie restriction (CR) and by the coenzyme, nicotinamide adenine dinucleotide (NAD+). Sirtuins, specifically the nuclear SIRT1 and mitochondrial SIRT3, have been shown to have predominantly neuroprotective roles in the CNS while the cytoplasmic sirtuin, SIRT2 is largely associated with neurodegeneration. A systematic study of sirtuins in the ENS and their effect on enteric neuronal growth and survival has not been conducted. Recent studies, however, also link sirtuins with important hormones such as leptin, ghrelin, melatonin, and serotonin which influence many important processes including satiety, mood, circadian rhythm, and gut homeostasis. In this review, we address emerging roles of sirtuins in modulating the metabolic challenges from aging, obesity, and diabetes that lead to neurodegeneration in the ENS and CNS. We also highlight a novel role for sirtuins along the microbiota-gut-brain axis in modulating neurodegeneration

Needle(s) in the Haystack – Synchronous Multifocal Tumor Induced Osteomalacia

This is the author accepted manuscript. The final version is available from Endocrine Society via http://dx.doi.org/10.1210/jc.2015-3854MG is supported by the NIHR Cambridge Biomedical Research Centre

Knowledge, attitudes and practice survey about antimicrobial resistance and prescribing among physicians in a hospital setting in Lima, Peru

BACKGROUND: Misuse of antimicrobials (AMs) and antimicrobial resistance (AMR) are global concerns. The present study evaluated knowledge, attitudes and practices about AMR and AM prescribing among medical doctors in two large public hospitals in Lima, Peru, a middle-income country. METHODS: Cross-sectional study using a self-administered questionnaire RESULTS: A total of 256 participants completed the questionnaire (response rate 82%). Theoretical knowledge was good (mean score of 6 +/- 1.3 on 7 questions) in contrast to poor awareness (< 33%) of local AMR rates of key-pathogens. Participants strongly agreed that AMR is a problem worldwide (70%) and in Peru (65%), but less in their own practice (22%). AM overuse was perceived both for the community (96%) and the hospital settings (90%). Patients' pressure to prescribing AMs was considered as contributing to AM overuse in the community (72%) more than in the hospital setting (50%). Confidence among AM prescribing was higher among attending physicians (82%) compared to residents (30%, p < 0.001%). Sources of information considered as very useful/useful included pocket-based AM prescribing guidelines (69%) and internet sources (62%). Fifty seven percent of participants regarded AMs in their hospitals to be of poor quality. Participants requested more AM prescribing educational programs (96%) and local AM guidelines (92%). CONCLUSIONS: This survey revealed topics to address during future AM prescribing interventions such as dissemination of information about local AMR rates, promoting confidence in the quality of locally available AMs, redaction and dissemination of local AM guidelines and addressing the general public, and exploring the possibilities of internet-based training

Targeted Deletion of Neuropeptide Y (NPY) Modulates Experimental Colitis

Neurogenic inflammation plays a major role in the pathogenesis of inflammatory bowel disease (IBD). We examined the role of neuropeptide Y (NPY) and neuronal nitric oxide synthase (nNOS) in modulating colitis.Colitis was induced by administration of dextran sodium sulphate (3% DSS) or streptomycin pre-treated Salmonella typhimurium (S.T.) in wild type (WT) and NPY (NPY(-/-)) knockout mice. Colitis was assessed by clinical score, histological score and myeloperoxidase activity. NPY and nNOS expression was assessed by immunostaining. Oxidative stress was assessed by measuring catalase activity, glutathione and nitrite levels. Colonic motility was assessed by isometric muscle recording in WT and DSS-treated mice.DSS/S.T. induced an increase in enteric neuronal NPY and nNOS expression in WT mice. WT mice were more susceptible to inflammation compared to NPY(-/-) as indicated by higher clinical & histological scores, and myeloperoxidase (MPO) activity (p<0.01). DSS-WT mice had increased nitrite, decreased glutathione (GSH) levels and increased catalase activity indicating more oxidative stress. The lower histological scores, MPO and chemokine KC in S.T.-treated nNOS(-/-) and NPY(-/-)/nNOS(-/-) mice supported the finding that loss of NPY-induced nNOS attenuated inflammation. The inflammation resulted in chronic impairment of colonic motility in DSS-WT mice. NPY -treated rat enteric neurons in vitro exhibited increased nitrite and TNF-alpha production.NPY mediated increase in nNOS is a determinant of oxidative stress and subsequent inflammation. Our study highlights the role of neuronal NPY and nNOS as mediators of inflammatory processes in IBD