34,691 research outputs found
Ultrafast Magnetization Dynamics in Diluted Magnetic Semiconductors
We present a dynamical model that successfully explains the observed time
evolution of the magnetization in diluted magnetic semiconductor quantum wells
after weak laser excitation. Based on the pseudo-fermion formalism and a second
order many-particle expansion of the exact p-d exchange interaction, our
approach goes beyond the usual mean-field approximation. It includes both the
sub-picosecond demagnetization dynamics and the slower relaxation processes
which restore the initial ferromagnetic order in a nanosecond time scale. In
agreement with experimental results, our numerical simulations show that,
depending on the value of the initial lattice temperature, a subsequent
enhancement of the total magnetization may be observed within a time scale of
few hundreds of picoseconds.Comment: Submitted to PR
Phylogenomic and comparative genomic studies robustly demarcate two distinct clades of Pseudomonas aeruginosa strains: proposal to transfer the strains from an outlier clade to a novel species Pseudomonas paraeruginosa sp. nov
The strains of Pseudomonas aeruginosa exhibit considerable differences in their genotypic and pathogenic properties. To clarify their evolutionary/taxonomic relationships, comprehensive phylogenomic and comparative genomic studies were conducted on the genome sequences of 212 P. aeruginosa strains covering their genetic diversity. In a phylogenomic tree based on 118 conserved proteins, the analysed strains formed two distinct clades. One of these clades, Clade- 1, encompassing >70 % of the strains including the type strain DSM 50071T, represents the species P. aeruginosa sensu stricto. Clade- 2, referred to in earlier work as the outlier group, with NCTC 13628T as its type strain, constitutes a novel species level lineage. The average nucleotide identity, average amino acid identity and digital DNA–DNA hybridization values between the strains from Clade- 1 and Clade- 2 are in the range of 93.4–93.7, 95.1–95.3 and 52–53 %, respectively. The 16S rRNA gene of P. aeruginosa DSM 50071T also shows 98.3 % similarity to that of NCTC13628T. These values are lower than the suggested cut- off values for species distinction, indicating that the Clade- 2 strains (NCTC 13628T) constitute a new species. We also report the identification of 12 conserved signature indels in different proteins and 24 conserved signature proteins that are exclusively found in either Clade- 1 or Clade- 2, providing a reliable means for distinguishing these clades. Additionally, in contrast to swimming motility, twitching motility is only present in Clade- 1 strains. Based on earlier work, the strains from these two clades also differ in their pathogenic mechanisms (presence/absence of Type III secretion system), production of biosurfactants, phenazines and siderophores, and several other genomic characteristics. Based on the evidence from different studies, we propose that the Clade- 2 strains constitute a novel species for which the name Pseudomonas paraeruginosa is proposed. The type strain is NCTC 13628T (=PA7T=ATCC 9027T). The description of Pseudomonas aeruginosa is also emended to include information for different molecular markers specific for this species
Large-amplitude chirped coherent phonons in tellurium mediated by ultrafast photoexcited carrier diffusion
We report femtosecond time-resolved reflectivity measurements of coherent
phonons in tellurium performed over a wide range of temperatures (3K to 296K)
and pump laser intensities. A totally symmetric A coherent phonon at 3.6
THz responsible for the oscillations in the reflectivity data is observed to be
strongly positively chirped (i.e, phonon time period decreases at longer
pump-probe delay times) with increasing photoexcited carrier density, more so
at lower temperatures. We show for the first time that the temperature
dependence of the coherent phonon frequency is anomalous (i.e, increasing with
increasing temperature) at high photoexcited carrier density due to
electron-phonon interaction. At the highest photoexcited carrier density of
1.4 10cm and the sample temperature of 3K, the
lattice displacement of the coherent phonon mode is estimated to be as high as
0.24 \AA. Numerical simulations based on coupled effects of optical
absorption and carrier diffusion reveal that the diffusion of carriers
dominates the non-oscillatory electronic part of the time-resolved
reflectivity. Finally, using the pump-probe experiments at low carrier density
of 6 10 cm, we separate the phonon anharmonicity to
obtain the electron-phonon coupling contribution to the phonon frequency and
linewidth.Comment: 22 pages, 6 figures, submitted to PR
Extreme weather and psychiatric illnesses
Extreme weather changes as seen in recent years due to climate change are part of larger Anthropocene syndrome majorly caused by greenhouse gas emissions. The industrial revolution in 18th century and rapid globalisation in 20th century have majorly contributed to this change. Though the adverse impact of these changes on mental health are known, the scope of the impact is poorly understood. Climate change can impact mental health by direct and indirect way in short and long term which can range from mild distress to clinical illness. Researchers are trying to understand interaction between the determinants of psychiatric illnesses and climate change to predict future population-level responses to these changes. Policy makers, healthcare sector and communities will have to take responsibility to devise strategies to not only deal with health impacts but, to reduce greenhouse gas emission and global warming. Targeted strategies directed towards those at risk to develop psychiatric illnesses should be implemented.
An alternative explanation for the density depletions observed by Freja and Viking satellites
In this paper, we have studied the linear and nonlinear propagation of ion acoustic waves in the presence of electrons that follow the generalized (r,q) distribution. It has been shown that for positive values of r, which correspond to a flat-topped electron velocity distribution, the nonlinear ion acoustic waves admit rarefactive solitary structures or density depletions. It has been shown that the generalized (r,q) distribution function provides another way to explicate the density depletions observed by Freja and Viking satellites previously explained by proposing Cairns distribution function.In this paper, we have studied the linear and nonlinear propagation of ion acoustic waves in the presence of electrons that follow the generalized (r,q) distribution. It has been shown that for positive values of r, which correspond to a flat-topped electron velocity distribution, the nonlinear ion acoustic waves admit rarefactive solitary structures or density depletions. It has been shown that the generalized (r,q) distribution function provides another way to explicate the density depletions observed by Freja and Viking satellites previously explained by proposing Cairns distribution function
Comparative Proteomic Profiling of Methicillin‐Susceptible and Resistant Staphylococcus aureus
Purpose
Staphylococcus aureus is a highly successful human pathogen responsible for wide range of infections. In this study, we provide insights into the virulence, pathogenicity, and antimicrobial resistance determinants of methicillin susceptible and methicillin resistant Staphylococcus aureus (MSSA; MRSA) recovered from non‐healthcare environments.
Experiment design
Three environmental MSSA and three environmental MRSA were selected for proteomic profiling using iTRAQ MS/MS. Gene Ontology (GO) Annotation and Kyoto Encyclopedia of Genes and Genomes (KEGG) Pathway Annotation were applied to interpret the functions of the proteins detected.
Results
792 proteins were identified in MSSA and MRSA. Comparative analysis of MRSA and MSSA revealed that 8 of out 792 proteins were up‐regulated and 156 were down‐regulated. Proteins that had differences in abundance were predominantly involved in catalytic and binding activity. Among 164 differently abundant proteins, 29 were involved in pathogenesis, antimicrobial resistance, stress response, mismatch repair and cell wall synthesis. Twenty‐two proteins associated with pathogenicity, including spa, sbi, clfA and dlt were up‐regulated in MRSA. Moreover, the up‐regulated pathogenic protein entC2 in MSSA was determined to be a super antigen potentially capable of triggering toxic shock syndrome in the host.
Conclusions
Enhanced pathogenicity, antimicrobial resistance and stress response were observed in MRSA compared to MSSA
Modeling Large Deformation and Failure of Expanded Polystyrene Crushable Foam Using LS-DYNA
In the initial phase of the research work, quasistatic compression tests were conducted on the expanded polystyrene (EPS) crushable foam for material characterisation at low strain rates (8.3×10-3~8.3×10-2 s−1) to obtain the stress strain curves. The resulting stress strain curves are compared well with the ones found in the literature. Numerical analysis of compression tests was carried out to validate them against experimental results. Additionally gravity-driven drop tests were carried out using a long rod projectile with semispherical end that penetrated into the EPS foam block. Long rod projectile drop tests were simulated in LS-DYNA by using suggested parameter enhancements that were able to compute the material damage and failure response precisely. The material parameters adjustment for successful modelling has been reported
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