An interactive retrieval system for clinical trial studies with context-dependent protocol elements.

A well-defined protocol for a clinical trial guarantees a successful outcome report. When designing the protocol, most researchers refer to electronic databases and extract protocol elements using a keyword search. However, state-of-the-art database systems only offer text-based searches for user-entered keywords. In this study, we present a database system with a context-dependent and protocol-element-selection function for successfully designing a clinical trial protocol. To do this, we first introduce a database for a protocol retrieval system constructed from individual protocol data extracted from 184,634 clinical trials and 13,210 frame structures of clinical trial protocols. The database contains a variety of semantic information that allows the filtering of protocols during the search operation. Based on the database, we developed a web application called the clinical trial protocol database system (CLIPS; available at https://corus.kaist.edu/clips). This system enables an interactive search by utilizing protocol elements. To enable an interactive search for combinations of protocol elements, CLIPS provides optional next element selection according to the previous element in the form of a connected tree. The validation results show that our method achieves better performance than that of existing databases in predicting phenotypic features

Femtosecond laser micromilling of Si wafers

Femtosecond laser micromilling of silicon is investigated using a regeneratively amplified 775 nm Ti:Sapphire laser with a pulse duration of 150 fs operating at 1 kHz repetition rate. The morphological observation and topological analysis of craters fabricated by single-shot laser irradiation indicated that the material removal is thermal in nature and there are two distinct ablation regimes of low fluence and higher fluence with logarithmical relations between the ablation depth and the laser fluence. Crater patterns were categorized into four characteristic groups and their formation mechanisms were investigated. Femtosecond laser micromilling of pockets in silicon was performed. The effect of process parameters such as pulse energy, translation speed, and the number of passes on the material removal rate and the formation of cone-shaped microstructures were investigated. The results indicate that the microstructuring mechanism has a strong dependence on the polarization, the number of passes and laser fluence. The optimal laser fluence range for Si micromilling was found to be 2\u20138 J/cm2 and the milling efficiency attains its maximum between 10 and 20 J/cm2.Peer reviewed: YesNRC publication: Ye

Femtosecond laser patterning of Ta0.1W0.9Ox/ITO thin film stack

Selective laser patterning of thin films in a multilayered structure is an emerging technology for process development and fabrication of optoelectronics and microelectronics devices. In this work, femtosecond laser patterning of electrochromic Ta0.1W0.9Ox film coated on ITO glass has been studied to understand the selective removal mechanism and to determine the optimal parameters for patterning process. A 775 nm Ti:sapphire laser with a pulse duration of 150 fs operating at 1 kHz was used to irradiate the thin film stacks with variations in process parameters such as laser fluence, feedrate and numerical aperture of objective lens. The surface morphologies of the laser irradiated regions have been examined using a scanning electron microscopy and an optical surface profiler. Morphological analysis indicates that the mechanism responsible for the removal of Ta0.1W0.9Ox thin films from the ITO glass is a combination of blistering and explosive fracture induced by abrupt thermal expansion. Although the pattern quality is divided into partial removal, complete removal, and ITO film damage, the ITO film surface is slightly melted even at the complete removal condition. Optimal process window, which results in complete removal of Ta0.1W0.9Ox thin film without ablation damage in the ITO layer, have been established. From this study, it is found that focusing lens with longer focal length is preferable for damage-free pattern generation and shorter machining time.Peer reviewed: YesNRC publication: Ye

High-quality hole drilling in alumina wafers using femtosecond laser

The topography, radial spreading and chemical composition of the slag produced during percussion and trepanning hole drilling process using femtosecond laser have been investigated. Results on optical microscopy, electron scanning microscopy and energy dispersion spectroscopy analysis are presented. While there is no significant difference in the average ablation rate between the near IR femtosecond laser in comparison to the UV nanosecond laser ablation of Al2O3 ceramics, near IR femtosecond laser provides better precision and quality. Absence of particulates due to resolidification of molten material around the hole was also observed. The slag consisted of ultrafind powder formed by the condensation of the supersaturated ablation plume. This slag can easily be removed using ultrasonic bath with the mixture of acetone and water. Combining the trepanning hole drilling method, femtosecond laser opens up a new door for production of high precision micro via holes in alumina wafers.NRC publication: Ye

Laser fabrication of high temperature thin film sensors for gas turbines

Accurate measurements of the temperature distributions in hot section of components are indispensible for the prognostic and health management of gas turbines. In this research, multilayer thin film R-type Pt/Pt-13%Rh thermocouples have been successfully fabricated by combining pulsed laser deposition and laser micromachining techniques. The performance of the sensors was evaluated in an air furnace to monitor the temperatures up to 600\ub0C and the results were compared to those of conventional R-type and K-type wire thermocouples. The temperature readings by the three types of thermocouples were almost identical, indicating that the new approach of using laser processes to fabricate multilayer thin film thermocouples is feasible.Peer reviewed: NoNRC publication: Ye

Characteristics of Hydrothermal Carbonization Hydrochar Derived from Cattle Manure

The characteristics of hydrothermal carbonization hydrochar derived from cattle manure including excrements and lignocellulosic biomass were analyzed. The effects of hydrothermal carbonization were evaluated by varying the reaction temperatures in the range of 180~240 °C. The hydrochars were evaluated with respect to their usefulness as renewable fuels via physicochemical analysis and pyrolysis processes. As reaction temperatures increased, the fractions of fixed carbon in proximate analyses, carbon elements in ultimate analyses, and higher heating values of hydrothermally carbonized biochars increased in correlation with the primary reactions of coalification. Various correlations were derived with the characteristics of hydrochars in order to be utilized for operating and designing HTC reactors for cattle manure. The correlation between the O/C and H/C ratios was deduced on the basis of a van Krevelen diagram. The interaction equation was represented with the increased fraction of HHV compared to the reaction temperature of hydrothermal carbonization. The ultimate correlation for the estimation of higher heating values was suggested for HTC hydrochars. Moreover, the pyrolysis characteristics and kinetic parameters of the cattle manure and hydrochar were deduced by utilizing a multi-step kinetic model scheme. As the HTC reaction temperature increased, the global activation energy and the pre-exponential factors of hydrochars decreased in the low-temperature section and increased in the high-temperature section

An interactive retrieval system for clinical trial studies with context-dependent protocol elements.

A well-defined protocol for a clinical trial guarantees a successful outcome report. When designing the protocol, most researchers refer to electronic databases and extract protocol elements using a keyword search. However, state-of-the-art database systems only offer text-based searches for user-entered keywords. In this study, we present a database system with a context-dependent and protocol-element-selection function for successfully designing a clinical trial protocol. To do this, we first introduce a database for a protocol retrieval system constructed from individual protocol data extracted from 184,634 clinical trials and 13,210 frame structures of clinical trial protocols. The database contains a variety of semantic information that allows the filtering of protocols during the search operation. Based on the database, we developed a web application called the clinical trial protocol database system (CLIPS; available at https://corus.kaist.edu/clips). This system enables an interactive search by utilizing protocol elements. To enable an interactive search for combinations of protocol elements, CLIPS provides optional next element selection according to the previous element in the form of a connected tree. The validation results show that our method achieves better performance than that of existing databases in predicting phenotypic features