Instability of the symmetric Couette-flow in a granular gas: hydrodynamic field profiles and transport

We investigate the inelastic hard disk gas sheared by two parallel bumpy walls (Couette-flow). In our molecular dynamic simulations we found a sensitivity to the asymmetries of the initial condition of the particle places and velocities and an asymmetric stationary state, where the deviation from (anti)symmetric hydrodynamic fields is stronger as the normal restitution coefficient decreases. For the better understanding of this sensitivity we carried out a linear stability analysis of the former kinetic theoretical solution [Jenkins and Richman: J. Fluid. Mech. {\bf 171} (1986)] and found it to be unstable. The effect of this asymmetry on the self-diffusion coefficient is also discussed.Comment: 9 pages RevTeX, 14 postscript figures, sent to Phys. Rev.

The interaction between colloids in polar mixtures above Tc

We calculate the interaction potential between two colloids immersed in an aqueous mixture containing salt near or above the critical temperature. We find an attractive interaction far from the coexistence curve due to the combination of preferential solvent adsorption at the colloids' surface and preferential ion solvation. We show that the ion-specific interaction strongly depends on the amount of salt added as well as on the mixture composition. Our results are in accord with recent experiments. For a highly antagonistic salt of hydrophilic anions and hydrophobic cations, a repulsive interaction at an intermediate inter-colloid distance is predicted even though both the electrostatic and adsorption forces alone are attractive.Comment: 9 pages, 6 figure

Transport coefficients for an inelastic gas around uniform shear flow: Linear stability analysis

The inelastic Boltzmann equation for a granular gas is applied to spatially inhomogeneous states close to the uniform shear flow. A normal solution is obtained via a Chapman-Enskog-like expansion around a local shear flow distribution. The heat and momentum fluxes are determined to first order in the deviations of the hydrodynamic field gradients from their values in the reference state. The corresponding transport coefficients are determined from a set of coupled linear integral equations which are approximately solved by using a kinetic model of the Boltzmann equation. The main new ingredient in this expansion is that the reference state $f^{(0)}$ (zeroth-order approximation) retains all the hydrodynamic orders in the shear rate. In addition, since the collisional cooling cannot be compensated locally for viscous heating, the distribution $f^{(0)}$ depends on time through its dependence on temperature. This means that in general, for a given degree of inelasticity, the complete nonlinear dependence of the transport coefficients on the shear rate requires the analysis of the {\em unsteady} hydrodynamic behavior. To simplify the analysis, the steady state conditions have been considered here in order to perform a linear stability analysis of the hydrodynamic equations with respect to the uniform shear flow state. Conditions for instabilities at long wavelengths are identified and discussed.Comment: 7 figures; previous stability analysis modifie

Cooling dynamics of a dilute gas of inelastic rods: a many particle simulation

We present results of simulations for a dilute gas of inelastically colliding particles. Collisions are modelled as a stochastic process, which on average decreases the translational energy (cooling), but allows for fluctuations in the transfer of energy to internal vibrations. We show that these fluctuations are strong enough to suppress inelastic collapse. This allows us to study large systems for long times in the truely inelastic regime. During the cooling stage we observe complex cluster dynamics, as large clusters of particles form, collide and merge or dissolve. Typical clusters are found to survive long enough to establish local equilibrium within a cluster, but not among different clusters. We extend the model to include net dissipation of energy by damping of the internal vibrations. Inelatic collapse is avoided also in this case but in contrast to the conservative system the translational energy decays according to the mean field scaling law, E(t)\propto t^{-2}, for asymptotically long times.Comment: 10 pages, 12 figures, Latex; extended discussion, accepted for publication in Phys. Rev.

Oncology-led early identification of nutritional risk: a pragmatic, evidence-based protocol (PRONTO)

Simple Summary Early identification of patients on antineoplastic therapy who are at risk for or already malnourished is critical for optimizing treatment success. Malnourished patients are at increased risk for being unable to tolerate the most effective 'level' and 'duration' of treatment, with grave implications for both the short- (during treatment) and long-term outcomes. Herein, we provide a practical PROtocol for NuTritional risk in Oncology (PRONTO) to enable oncologists to identify patients with or at risk of malnutrition for further evaluation and follow-up with members of the multidisciplinary care team (MDT). Additional guidance is included on the oncologist-led provision of nutritional support if referral to a dietary service is not available. Nutritional issues, including malnutrition, low muscle mass, sarcopenia (i.e., low muscle mass and strength), and cachexia (i.e., weight loss characterized by a continuous decline in skeletal muscle mass, with or without fat loss), are commonly experienced by patients with cancer at all stages of disease. Cancer cachexia may be associated with poor nutritional status and can compromise a patient's ability to tolerate antineoplastic therapy, increase the likelihood of post-surgical complications, and impact long-term outcomes including survival, quality of life, and function. One of the primary nutritional problems these patients experience is malnutrition, of which muscle depletion represents a clinically relevant feature. There have been recent calls for nutritional screening, assessment, treatment, and monitoring as a consistent component of care for all patients diagnosed with cancer. To achieve this, there is a need for a standardized approach to enable oncologists to identify patients commencing and undergoing antineoplastic therapy who are or who may be at risk of malnutrition and/or muscle depletion. This approach should not replace existing tools used in the dietitian's role, but rather give the oncologist a simple nutritional protocol for optimization of the patient care pathway where this is needed. Given the considerable time constraints in day-to-day oncology practice, any such approach must be simple and quick to implement so that oncologists can flag individual patients for further evaluation and follow-up with appropriate members of the multidisciplinary care team. To enable the rapid and routine identification of patients with or at risk of malnutrition and/or muscle depletion, an expert panel of nutrition specialists and practicing oncologists developed the PROtocol for NuTritional risk in Oncology (PRONTO). The protocol enables the rapid identification of patients with or at risk of malnutrition and/or muscle depletion and provides guidance on next steps. The protocol is adaptable to multiple settings and countries, which makes implementation feasible by oncologists and may optimize patient outcomes. We advise the use of this protocol in countries/clinical scenarios where a specialized approach to nutrition assessment and care is not available

Shot noise suppression at room temperature in atomic-scale Au junctions

Shot noise encodes additional information not directly inferable from simple electronic transport measurements. Previous measurements in atomic-scale metal junctions at cryogenic temperatures have shown suppression of the shot noise at particular conductance values. This suppression demonstrates that transport in these structures proceeds via discrete quantum channels. Using a high frequency technique, we simultaneously acquire noise data and conductance histograms in Au junctions at room temperature and ambient conditions. We observe noise suppression at up to three conductance quanta, with possible indications of current-induced local heating and $1/f$ noise in the contact region at high biases. These measurements demonstrate the quantum character of transport at room temperature at the atomic scale. This technique provides an additional tool for studying dissipation and correlations in nanodevices.Comment: 15 pages, 4 figures + supporting information (6 pages, 6 figures

Sand as Maxwell's demon

We consider a dilute gas of granular material inside a box, kept in a stationary state by shaking. A wall separates the box into two identical compartments, save for a small hole at some finite height $h$. As the gas is cooled, a second order phase transition occurs, in which the particles preferentially occupy one side of the box. We develop a quantitative theory of this clustering phenomenon and find good agreement with numerical simulations

Characteristics of transposable element exonization within human and mouse

Insertion of transposed elements within mammalian genes is thought to be an important contributor to mammalian evolution and speciation. Insertion of transposed elements into introns can lead to their activation as alternatively spliced cassette exons, an event called exonization. Elucidation of the evolutionary constraints that have shaped fixation of transposed elements within human and mouse protein coding genes and subsequent exonization is important for understanding of how the exonization process has affected transcriptome and proteome complexities. Here we show that exonization of transposed elements is biased towards the beginning of the coding sequence in both human and mouse genes. Analysis of single nucleotide polymorphisms (SNPs) revealed that exonization of transposed elements can be population-specific, implying that exonizations may enhance divergence and lead to speciation. SNP density analysis revealed differences between Alu and other transposed elements. Finally, we identified cases of primate-specific Alu elements that depend on RNA editing for their exonization. These results shed light on TE fixation and the exonization process within human and mouse genes.Comment: 11 pages, 4 figure

First normal stress difference and crystallization in a dense sheared granular fluid

The first normal stress difference (${\mathcal N}_1$) and the microstructure in a dense sheared granular fluid of smooth inelastic hard-disks are probed using event-driven simulations. While the anisotropy in the second moment of fluctuation velocity, which is a Burnett-order effect, is known to be the progenitor of normal stress differences in {\it dilute} granular fluids, we show here that the collisional anisotropies are responsible for the normal stress behaviour in the {\it dense} limit. As in the elastic hard-sphere fluids, ${\mathcal N}_1$ remains {\it positive} (if the stress is defined in the {\it compressive} sense) for dilute and moderately dense flows, but becomes {\it negative} above a critical density, depending on the restitution coefficient. This sign-reversal of ${\mathcal N}_1$ occurs due to the {\it microstructural} reorganization of the particles, which can be correlated with a preferred value of the {\it average} collision angle $\theta_{av}=\pi/4 \pm \pi/2$ in the direction opposing the shear. We also report on the shear-induced {\it crystal}-formation, signalling the onset of fluid-solid coexistence in dense granular fluids. Different approaches to take into account the normal stress differences are discussed in the framework of the relaxation-type rheological models.Comment: 21 pages, 13 figure

Velocity correlations in granular materials

A system of inelastic hard disks in a thin pipe capped by hot walls is studied with the aim of investigating velocity correlations between particles. Two effects lead to such correlations: inelastic collisions help to build localized correlations, while momentum conservation and diffusion produce long ranged correlations. In the quasi-elastic limit, the velocity correlation is weak, but it is still important since it is of the same order as the deviation from uniformity. For system with stronger inelasticity, the pipe contains a clump of particles in highly correlated motion. A theory with empirical parameters is developed. This theory is composed of equations similar to the usual hydrodynamic laws of conservation of particles, energy, and momentum. Numerical results show that the theory describes the dynamics satisfactorily in the quasi-elastic limit, however only qualitatively for stronger inelasticity.Comment: 12 pages (REVTeX), 15 figures (Postscript). submitted to Phys. Rev.