8 research outputs found

    Distinct metabolite classes in root exudates are indicative for field- or hydroponically-grown cover crops

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    Introduction: Plants release a large variety of metabolites via their roots to shape physico-chemical soil properties and biological processes in the rhizosphere. While hydroponic growth conditions facilitate accessibility of the root system and recovery of root exudates, the natural soil environment can alter root metabolism and exudate secretion, raising the question to what extent the quantity and composition of root exudates released in hydroponic growth systems reflect those recovered from soil-grown roots. Methods: Using a root washing method, we sampled root exudates from four field-grown cover crop species with wide taxonomic distance, namely white mustard, lacy phacelia, bristle oat, and Egyptian clover. A set of primary metabolites and secondary metabolites were analysed in a targeted and untargeted LC-MS-based approach, respectively, for comparison with exudates obtained from hydroponically cultured plants. Results and discussion: We found that hydroponically cultivated plants released a larger amount of total carbon, but that the recovery of total carbon was not indicative for the diversity of metabolites in root exudates. In the field, root exudates from phacelia and clover contained 2.4 to 3.8 times more secondary metabolites, whereas carbon exudation in hydroponics was 5- to 4-fold higher. The composition of the set of metabolites identified using the untargeted approach was much more distinct among all species and growth conditions than that of quantified primary metabolites. Among secondary metabolite classes, the presence of lipids and lipid-like molecules was highly indicative for field samples, while the release of a large amount of phenylpropanoids, organoheterocyclic compounds or benzenoids was characteristic for clover, mustard or oat, respectively, irrespective of the cultivation condition. However, at the compound level the bulk of released metabolites was specific for cultivation conditions in every species, which implies that hydroponically sampled root exudates poorly reflect the metabolic complexity of root exudates recovered from field-grown plants

    Prüfung von Zuchtlinien der Weißen Lupine (Lupinus albus L.) auf Anthraknoseresistenz

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    White lupin (Lupinus albus L.) is a protein plant adapted to the conditions of middle Europe. Presently, no variety with a sufficient resistance to anthracnose, caused by Colletotrichum lupini, is available, and cultivation of white lupins in Germany has hardly any relevance. Making this crop available for cultivation again would expand the range of domestic protein crops and increase the biological diversity on agriculturally used fields. To make this crop worth cultivated again, it is essential to develop white lupin varieties with a high resistance to anthracnose. The breeding lines tested in this study proofed to have a higher level of resistance towards anthracnose and are thus yielding higher compared to currently available varieties

    Distinct metabolite classes in root exudates are indicative for field- or hydroponically-grown cover crops

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    IntroductionPlants release a large variety of metabolites via their roots to shape physico-chemical soil properties and biological processes in the rhizosphere. While hydroponic growth conditions facilitate accessibility of the root system and recovery of root exudates, the natural soil environment can alter root metabolism and exudate secretion, raising the question to what extent the quantity and composition of root exudates released in hydroponic growth systems reflect those recovered from soil-grown roots.MethodsUsing a root washing method, we sampled root exudates from four field-grown cover crop species with wide taxonomic distance, namely white mustard, lacy phacelia, bristle oat, and Egyptian clover. A set of primary metabolites and secondary metabolites were analysed in a targeted and untargeted LC-MS-based approach, respectively, for comparison with exudates obtained from hydroponically cultured plants.Results and discussionWe found that hydroponically cultivated plants released a larger amount of total carbon, but that the recovery of total carbon was not indicative for the diversity of metabolites in root exudates. In the field, root exudates from phacelia and clover contained 2.4 to 3.8 times more secondary metabolites, whereas carbon exudation in hydroponics was 5- to 4-fold higher. The composition of the set of metabolites identified using the untargeted approach was much more distinct among all species and growth conditions than that of quantified primary metabolites. Among secondary metabolite classes, the presence of lipids and lipid-like molecules was highly indicative for field samples, while the release of a large amount of phenylpropanoids, organoheterocyclic compounds or benzenoids was characteristic for clover, mustard or oat, respectively, irrespective of the cultivation condition. However, at the compound level the bulk of released metabolites was specific for cultivation conditions in every species, which implies that hydroponically sampled root exudates poorly reflect the metabolic complexity of root exudates recovered from field-grown plants

    Soil nitrogen and water management by winter-killed catch crops

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    Improving N cycling in agroecosystems is one of the key challenges in reducing the environmental footprint of agriculture. Further, uncertainty in precipitation makes crop water management relevant in regions where it has not been necessary thus far. Here, we focus on the potential of winter-killed catch crops (CCs) to reduce N leaching losses from N mineralization over the winter and from soil water management. We compared four single CCs (white mustard, phacelia, Egyptian clover and bristle oat) and two CC mixtures with 4 and 12 plant species (Mix4 and Mix12) with a fallow treatment. High-resolution soil mineral N (Nmin) monitoring in combination with the modelling of spatiotemporal dynamics served to assess N cycling under winter-killed CCs, while soil water was continuously monitored in the rooting zone. Catch crops depleted the residual Nmin pools by between 40 % and 72 % compared to the fallow. The amount of residual N uptake was lowest for clover and not significantly different among the other CCs. Catch crops that produce high N litter materials, such as clover and mustard leaves, showed an early N mineralization flush immediately after their termination and the highest leaching losses from litter mineralization over the winter. Except for clover, all CCs showed Nmin values between 18 % and 92 % higher on the sowing date of the following maize crop. However, only Mix12 was statistically significant. Catch crops depleted the soil water storage in the rooting zone during their growth in autumn and early winter, but preserved water later on when their residues covered the ground. The shallow incorporation of CC residues increased water storage capacity during the cropping season of the main crop even under reduced soil water availability. Hence, catch cropping is not just a simple plant cover for the winter but improves the growth conditions for the following crop with decreased N losses. Mixtures have been shown to compensate for the weaknesses of individual CC species in terms of nutrient capture, mineralization and transfer to the following main crop as well as for soil water management. Detailed knowledge about plant performance during growth and litter mineralization patterns is necessary to make optimal use of their potential

    Influence of small-scale spatial variability of soil properties on yield formation of winter wheat

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    Background: With the increasing development of sophisticated precision farming techniques, high-resolution application maps are frequently discussed as a key factor in increasing yield potential. However, yield potential maps based on multiple soil properties measurements are rarely part of current farming practices. Furthermore, small-scale differences in soil properties have not been taken into account. Methods: To investigate the impact of soil property changes at high resolution on yield, a field trial has been divided into a sampling grid of 42 plots. The soil properties in each plot were determined at three soil depths. Grain yield and yield formation of winter wheat were analyzed at two sites. Results: Multiple regression analyses of soil properties with yield measures showed that the soil contents of organic carbon, silt, and clay in the top and subsoil explained 45–46% of the variability in grain yield. However, an increasing clay content in the topsoil correlated positively with grain yield and tiller density. In contrast, a higher clay content in the subsoil led to a decrease in grain yield. A cluster analysis of soil texture was deployed to evaluate whether the soil´s small-scale differences caused crucial differences in yield formation. Significant differences in soil organic carbon, yield, and yield formation were observed among clusters in each soil depth. Conclusion: These results show that small-scale lateral and vertical differences in soil properties can strongly impact crop yields and should be considered to improve site-specific cropping techniques further

    Catch crop mixtures have higher potential for nutrient carry-over than pure stands under changing environments

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    Winter catch crops are grown to scavenge nutrients over a period of unfavorable growth conditions and to conserve nutrients for subsequent release to the following main crop. Since environmental conditions have a strong impact on the growth and nutrient capture in roots and shoots of individual catch crop species, we anticipated that mixtures will be more durable and efficient in nutrient capture due to compensatory effects among component species. We tested this hypothesis and determined the nitrogen and phosphorus accumulation in the shoots and roots of four catch crop species grown in pure vs. mixed stands at two sites for two or three years. Element concentrations were determined in the root and shoot biomass of each species and used to calculate the nutrient pool fixed in the root or shoot biomass. A qPCR-based technique was applied to quantify the root biomass of individual species based on species-specific DNA sequences. Despite considerable variation across environments, the overall plant biomass of white mustard (Sinapis alba), lacy phacelia (Phacelia tanacetifolia) and bristle oat (Avena strigosa) was similar and higher than that of Egyptian clover (Trifolium alexandrinum). While pure stands varied 6- to 24-fold in shoot biomass depending on environmental conditions, the variation was only ~3-fold for catch crop mixtures, with less pronounced variation in the root biomass. In general, the root biomass was comparable to the shoot biomass in each species. Roots contributed 26–46% of the nitrogen and 36–48% of the phosphorus to the total accumulation of these nutrients in the catch crop biomass, thus emphasizing the importance of plant roots as belowground nutrient pool for potential carry-over of nutrients to the subsequent crop. Although the mixture was mostly dominated by two of the four species, namely mustard and phacelia, it captured similar or even larger amounts of nutrients than the best-performing pure stand under any growth condition. This was the case for shoot- and for root-bound nutrients. Our results indicate that catch crop mixtures have higher durability than pure cultures to environmental variations. The amount of nitrogen captured by the mixture meets the average postharvest nitrogen that is left over by a wide range of cash crops, thus emphasizing that catch crop mixtures represent an efficient nutrient management tool in crop rotations. © 202

    Interspecific competition among catch crops modifies vertical root biomass distribution and nitrate scavenging in soils

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    The potential of a plant species to acquire nutrients depends on its ability to explore the soil by its root system. Co-cultivation of different species is anticipated to lead to vertical root niche differentiation and thus to higher soil nutrient depletion. Using a qPCR-based method we quantified root biomass distribution of four catch crop species in vertical soil profiles in pure vs. mixed stands. Pure stands of mustard and phacelia robustly reached 70 cm soil depth, while oat preferably colonized upper soil layers, and clover developed the shallowest and smallest root system. Analysis of residual nitrate pools in different soil depths and correlation with root biomass showed that, besides rooting depth also root biomass determines soil nitrogen depletion. While occupying the same vertical niches as in pure stands, mustard and phacelia dominated total root biomass of the mix. In contrast, root biomass of clover and oat was severely suppressed in presence of the other species. Below-ground biomass profiling indicated low niche complementarity among the root systems of the examined species. Nonetheless, the mixture mostly overyielded root biomass of the pure stands and thus shows higher potential for efficient soil exploration by roots

    Catch crop diversity increases rhizosphere carbon input and soil microbial biomass

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    Catch crops increase plant species richness in crop rotations, but are most often grown as pure stands. Here, we investigate the impacts of increasing plant diversity in catch crop rotations on rhizosphere C input and microbial utilization. Mustard (Sinapis alba L.) planted as a single cultivar was compared to diversified catch crop mixtures of four (Mix4) or 12 species (Mix12). We traced the C transfer from shoots to roots towards the soil microbial community and the soil respiration in a 13C pulse labelling field experiment. Net CO2-C uptake from the atmosphere increased by two times in mix 4 and more than three times in mix 12. Higher net ecosystem C production was linked to increasing catch crop diversity and increased belowground transfer rates of recently fixed photoassimilates. The higher rhizosphere C input stimulated the growth and activity of the soil microbiome, which was investigated by phospholipid fatty acid (PLFA) analyses. Total microbial biomass increased from 14 to 22 g m−2 as compared to the fallow and was 18 and 8% higher for mix 12 and mix 4 as compared to mustard. In particular, the fungal and actinobacterial communities profited the most from the higher belowground C input and their biomass increased by 3.4 and 1.3 times as compared to the fallow. The residence time of the 13C pulse, traced in the CO2 flux from the soil environment, increased with plant diversity by up to 1.8 times. The results of this study suggest positive impacts of plant diversity on C cycling by higher atmospheric C uptake, higher transport rates towards the rhizosphere, higher microbial incorporation and prolonged residence time in the soil environment. We conclude that diversified catch crop mixtures improve the efficiency of C cycling in cropping systems and provide a promising tool for sustainable soil management
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