Advances in understanding Norway spruce natural resistance to needle bladder rust infection: transcriptional and secondary metabolites profiling

Needle rust caused by the fungus Chrysomyxa rhododendri causes significant growth decline and increased mortality of young Norway spruce trees in subalpine forests. Extremely rare trees with enhanced resistance represent promising candidates for practice-oriented reproduction approaches. They also enable the investigation of tree molecular defence and resistance mechanisms against this fungal disease. Here, we combined RNA-Seq, RT-qPCR and secondary metabolite analyses during a period of 38 days following natural infection to investigate differences in constitutive and infection-induced defence between the resistant genotype PRA-R and three susceptible genotypes.Gene expression and secondary metabolites significantly differed among genotypes from day 7 on and revealed already known, but also novel candidate genes involved in spruce molecular defence against this pathogen. Several key genes related to (here and previously identified) spruce defence pathways to needle rust were differentially expressed in PRA-R compared to susceptible genotypes, both constitutively (in non-symptomatic needles) and infection-induced (in symptomatic needles). These genes encoded both new and well-known antifungal proteins such as endochitinases and chitinases. Specific genetic characteristics concurred with varying phenolic, terpene, and hormone needle contents in the resistant genotype, among them higher accumulation of several flavonoids (mainly kaempferol and taxifolin), stilbenes, geranyl acetone, α-ionone, abscisic acid and salicylic acid.Combined transcriptional and metabolic profiling of the Norway spruce defence response to infection by C. rhododendri in adult trees under subalpine conditions confirmed the results previously gained on artificially infected young clones in the greenhouse, both regarding timing and development of infection, and providing new insights into genes and metabolic pathways involved. The comparison of genotypes with different degrees of susceptibility proved that several of the identified key genes are differently regulated in PRA-R, and that the resistant genotype combines a strong constitutive defence with an induced response in infected symptomatic needles following fungal invasion. Genetic and metabolic differences between the resistant and susceptible genotypes indicated a more effective hypersensitive response (HR) in needles of PRA-R that prevents penetration and spread of the rust fungus and leads to a lower proportion of symptomatic needles as well as reduced symptom development on the few affected needles

The geographic origin of old Douglas-fir stands growing in Central Europe

Since the nineteenth century, Douglas-fir seed sources have been widely used for establishment of forest stands outside its natural distribution range. In Europe, some of these old Douglas-fir stands are registered as seed stands and provide seed sources for nurseries, although it is unclear from which region in North America they originate. In recent years, the interest in planting Douglas-fir has increased substantially because the species is seen as a potential adaptation option to climate change. This makes the assignment of European Douglas-fir stands of unknown seed origin to their geographic origin in North America increasingly important, because the genetic quality of these plantations must be guaranteed. In this study, we use 13 nuSSR loci to investigate the origin of 67 Austrian and German Douglas-fir stands of unknown origin. We performed a hierarchical Bayesian cluster analysis using 38 native Douglas-fir populations. The resulting clusters are used as reference populations to assign the 67 Central European Douglas-fir stands from Austria and Germany planted more than 80 years ago. Our results suggest that the majority of our investigated Douglas-fir stands come from central Washington (USA), the recommended seed zones for Central Europe. Some stands were located outside the suggested area, e.g. central Oregon and Santa Fe (New Mexico). The accuracy assessment of our approach revealed the best performance for the highest hierarchical level, e.g. assigning populations either to the coastal or the Rocky Mountain variety. As expected, the uncertainty increases with decreasing hierarchical level. The final assessment, if an admixture of seed sources within the European Douglas-fir stands is evident suggests that 23 of the Douglas-fir stands show an admixture which was not detected in our Douglas-fir reference populations growing in the natural distribution range.© The Author(s) 201