Morphological and molecular characterization of two trematode worms in the gastropod Asolene pulchella (Anton, 1859)

Asolene pulchella (Anton, 1859) Asolene pulchella (Caenogastropoda, Ampullariidae) is a native gastropod from La Plata River. In a previous study we reported the presence of parasite forms of Trematoda (Plathyhelminthes) in the digestive gland of adult snails from Regatas Lake (Buenos Aires). In this work identified two parasites with a morphological and molecular approach. The digestive gland of A. pulchella showed a large amount of larval forms (sporocysts and rediae) with internal cercariae in diverse degree of development.Facultad de Ciencias Naturales y Muse

Morphological and molecular characterization of two trematode worms in the gastropod Asolene pulchella (Anton, 1859)

Asolene pulchella (Anton, 1859) Asolene pulchella (Caenogastropoda, Ampullariidae) is a native gastropod from La Plata River. In a previous study we reported the presence of parasite forms of Trematoda (Plathyhelminthes) in the digestive gland of adult snails from Regatas Lake (Buenos Aires). In this work identified two parasites with a morphological and molecular approach. The digestive gland of A. pulchella showed a large amount of larval forms (sporocysts and rediae) with internal cercariae in diverse degree of development.Facultad de Ciencias Naturales y Muse

The HSV-1 ICP27 RGG box specifically binds flexible, GC-rich sequences but not G-quartet structures

Herpes simplex virus 1 (HSV-1) protein ICP27, an important regulator for viral gene expression, directly recognizes and exports viral RNA through an N-terminal RGG box RNA binding motif, which is necessary and sufficient for RNA binding. An ICP27 N-terminal peptide, including the RGG box RNA binding motif, was expressed and its binding specificity was analyzed using EMSA and SELEX. DNA oligonucleotides corresponding to HSV-1 glycoprotein C (gC) mRNA, identified in a yeast three-hybrid analysis, were screened for binding to the ICP27 N-terminal peptide in EMSA experiments. The ICP27 N-terminus was able to bind most gC substrates. Notably, the ICP27 RGG box was unable to bind G-quartet structures recognized by the RGG domains of other proteins. SELEX analysis identified GC-rich RNA sequences as a common feature of recognition. NMR analysis of SELEX and gC sequences revealed that sequences able to bind to ICP27 did not form secondary structures and conversely, sequences that were not able to bind to ICP27 gave spectra consistent with base-pairing. Therefore, the ICP27 RGG box is unique in its recognition of nucleic acid sequences compared to other RGG box proteins; it prefers flexible, GC-rich substrates that do not form stable secondary structures

Extracellular matrix features discriminate aggressive HER2-positive breast cancer patients who benefit from trastuzumab treatment

We previously identified an extracellular matrix (ECM) gene expression pattern in breast cancer (BC), called ECM3, characterized by a high expression of genes encoding structural ECM proteins. Since ECM is reportedly implicated in response to therapy of BCs, the aim of this work is to investigate the prognostic and predictive value of ECM3 molecular classification in HER2-positive BCs. ECM3 resulted in a robust cluster that identified a subset of 25-37% of HER2-positive tumors with molecular aggressive features. ECM3 was significantly associated with worse prognosis in two datasets of HER2-positive BCs untreated with adjuvant therapy. Analyses carried out on two of our cohorts of patients treated or not with adjuvant trastuzumab showed association of ECM3 with worse prognosis only in patients not treated with trastuzumab. Moreover, investigating a dataset that includes gene profile data of tumors treated with neoadjuvant trastuzumab plus chemotherapy or chemotherapy alone, ECM3 was associated with increased pathological complete response if treated with trastuzumab. In the in vivo experiments, increased diffusion and trastuzumab activity were found in tumors derived from injection of HER2-positive cells with Matrigel that creates an ECM-rich tumor environment. Taken together, these results indicate that HER2-positive BCs classified as ECM3 have an aggressive phenotype but they are sensitive to trastuzumab treatment

Shedding New Light on Kaon-Nucleon/Nuclei Interaction and Its Astrophysical Implications with the AMADEUS Experiment at DAFNE

The AMADEUS experiment deals with the investigation of the low-energy kaon-nuclei hadronic interaction at the DA{\Phi}NE collider at LNF-INFN, which is fundamental to respond longstanding questions in the non-perturbative QCD strangeness sector. The antikaon-nucleon potential is investigated searching for signals from possible bound kaonic clusters, which would open the possibility for the formation of cold dense baryonic matter. The confirmation of this scenario may imply a fundamental role of strangeness in astrophysics. AMADEUS step 0 consisted in the reanalysis of 2004/2005 KLOE dataset, exploiting K- absorptions in H, 4He, 9Be and 12C in the setup materials. In this paper, together with a review on the multi-nucleon K- absorption and the particle identification procedure, the first results on the {\Sigma}0-p channel will be presented including a statistical analysis on the possible accomodation of a deeply bound stateComment: 6 pages, 2 figure, 1 table, HADRON 2015 conferenc

Unprecedented studies of the low-energy negatively charged kaons interactions in nuclear matter by AMADEUS

The AMADEUS experiment aims to provide unique quality data of $K^-$ hadronic interactions in light nuclear targets, in order to solve fundamental open questions in the non-perturbative strangeness QCD sector, like the controversial nature of the $\Lambda(1405)$ state, the yield of hyperon formation below threshold, the yield and shape of multi-nucleon $K^-$ absorption, processes which are intimately connected to the possible existence of exotic antikaon multi-nucleon clusters. AMADEUS takes advantage of the DA$\Phi$NE collider, which provides a unique source of monochromatic low-momentum kaons and exploits the KLOE detector as an active target, in order to obtain excellent acceptance and resolution data for $K^-$ nuclear capture on H, ${}^4$He, ${}^{9}$Be and ${}^{12}$C, both at-rest and in-flight. During the second half of 2012 a successful data taking was performed with a dedicated pure carbon target implemented in the central region of KLOE, providing a high statistic sample of pure at-rest $K^-$ nuclear interactions. For the future dedicated setups involving cryogenic gaseous targets are under preparation.Comment: 14 pages, 6 figure

Precise Measurement of Sigma Beam Asymmetry for Positive Pion Photoproduction on the Proton from 800 to 1500 Mev

The Sigma beam asymmetry for positive pion photoproduction on the proton has been measured over an angular range of 40-170 deg at photon energies from 0.8 to 1.5 GeV. The resulting data set includes 237 accurate points, 136 of these belonging to an almost unexplored domain above 1.05 GeV. Data of such high precision provide severe constraints for partial wave analyses. The influence of this experiment on the GW multipole analysis is demonstrated. Significant changes are found in multipoles connected to the S31(1620) and P13(1720) resonances. Comparisons using the MAID analysis are also presented.Comment: 11 pages, 4 eps figures. to be published in Physics Letters

A systematic approach to the Planck LFI end-to-end test and its application to the DPC Level 1 pipeline

The Level 1 of the Planck LFI Data Processing Centre (DPC) is devoted to the handling of the scientific and housekeeping telemetry. It is a critical component of the Planck ground segment which has to strictly commit to the project schedule to be ready for the launch and flight operations. In order to guarantee the quality necessary to achieve the objectives of the Planck mission, the design and development of the Level 1 software has followed the ESA Software Engineering Standards. A fundamental step in the software life cycle is the Verification and Validation of the software. The purpose of this work is to show an example of procedures, test development and analysis successfully applied to a key software project of an ESA mission. We present the end-to-end validation tests performed on the Level 1 of the LFI-DPC, by detailing the methods used and the results obtained. Different approaches have been used to test the scientific and housekeeping data processing. Scientific data processing has been tested by injecting signals with known properties directly into the acquisition electronics, in order to generate a test dataset of real telemetry data and reproduce as much as possible nominal conditions. For the HK telemetry processing, validation software have been developed to inject known parameter values into a set of real housekeeping packets and perform a comparison with the corresponding timelines generated by the Level 1. With the proposed validation and verification procedure, where the on-board and ground processing are viewed as a single pipeline, we demonstrated that the scientific and housekeeping processing of the Planck-LFI raw data is correct and meets the project requirements.Comment: 20 pages, 7 figures; this paper is part of the Prelaunch status LFI papers published on JINST: http://www.iop.org/EJ/journal/-page=extra.proc5/jins