ANTI-ANGIOGENIC ACTIVITY OF THE EXTRACTED FERMENTATION BROTH OF AN ENTOMOPATHOGENIC FUNGUS, CORDYCEPS MILITARIS 3936

Objective: Cordyceps militaris is an entomopathogen and known to exhibit significant therapeutic potential. In the present study, we aimed to extract various fractions (aqueous; hexane; chloroform & butanol) including active ingredient cordycepin from fermented broth of Cordyceps militaris followed by their evaluation as anti-angiogenic agents. Methods: The bioactive metabolite, cordycepin and various Cordyceps derived fractions were isolated from liquid culture of Cordyceps militaris using solvent-solvent extraction method followed by purification on silica gel column chromatography. Furthermore anti-angiogenic properties of extracted fermentation broth were also investigated using chorioallantoic membrane (CAM) assay. Results: Butanolic fractions, demonstrated the highest anti-angiogenic activity followed by chloroform, hexane and aqueous fractions of extracted fermentation broth. Anti-angiogenic studies for extracted cordycepin showed that 40 µg/egg dosage of cordycepin was sufficient to inhibit the branching of blood vessels significantly (~50%) in a CAM assay. Conclusion: It is concluded that butanolic extract/cordycepin from fermented broth of Cordyceps militaris potentially inhibits the angiogenesis and suggests that the inhibition of angiogenesis is one of the mechanisms by which Cordyceps militaris can mediate an anti-cancer effect

Surveillance for Anthrax Cases Associated with Contaminated Letters, New Jersey, Delaware, and Pennsylvania, 2001

In October 2001, two inhalational anthrax and four cutaneous anthrax cases, resulting from the processing of Bacillus anthracis–containing envelopes at a New Jersey mail facility, were identified. Subsequently, we initiated stimulated passive hospital-based and enhanced passive surveillance for anthrax-compatible syndromes. From October 24 to December 17, 2001, hospitals reported 240,160 visits and 7,109 intensive-care unit admissions in the surveillance area (population 6.7 million persons). Following a change to reporting criteria on November 8, the average of possible inhalational anthrax reports decreased 83% from 18 to 3 per day; the proportion of reports requiring follow-up increased from 37% (105/286) to 41% (47/116). Clinical follow-up was conducted on 214 of 464 possible inhalational anthrax patients and 98 possible cutaneous anthrax patients; 49 had additional laboratory testing. No additional cases were identified. To verify the limited scope of the outbreak, surveillance was essential, though labor-intensive. The flexibility of the system allowed interim evaluation, thus improving surveillance efficiency

CRAFT: a web-integrated cavity prediction tool based on flow transfer algorithm

Abstract Numerous computational methods, including evolutionary-based, energy-based, and geometrical-based methods, are utilized to identify cavities inside proteins. Cavity information aids protein function annotation, drug design, poly-pharmacology, and allosteric site investigation. This article introduces “flow transfer algorithm” for rapid and effective identification of diverse protein cavities through multidimensional cavity scan. Initially, it identifies delimiter and susceptible tetrahedra to establish boundary regions and provide seed tetrahedra. Seed tetrahedron faces are precisely scanned using the maximum circle radius to transfer seed flow to neighboring tetrahedra. Seed flow continues until terminated by boundaries or forbidden faces, where a face is forbidden if the estimated maximum circle radius is less or equal to the user-defined maximum circle radius. After a seed scanning, tetrahedra involved in the flow are clustered to locate the cavity. The CRAFT web interface integrates this algorithm for protein cavity identification with enhanced user control. It supports proteins with cofactors, hydrogens, and ligands and provides comprehensive features such as 3D visualization, cavity physicochemical properties, percentage contribution graphs, and highlighted residues for each cavity. CRAFT can be accessed through its web interface at http://pitools.niper.ac.in/CRAFT , complemented by the command version available at https://github.com/PGlab-NIPER/CRAFT/ . Scientific contribution Flow transfer algorithm is a novel geometric approach for accurate and reliable prediction of diverse protein cavities. This algorithm employs a distinct concept involving maximum circle radius within the 3D Delaunay triangulation to address diverse van der Waals radii while existing methods overlook atom specific van der Waals radii or rely on complex weighted geometric techniques