Experimental parasite infection causes genome-wide changes in DNA methylation

Parasites are arguably among the strongest drivers of natural selection, constraining hosts to evolve resistance and tolerance mechanisms. Although, the genetic basis of adaptation to parasite infection has been widely studied, little is known about how epigenetic changes contribute to parasite resistance and eventually, adaptation. Here, we investigated the role of host DNA methylation modifications to respond to parasite infections. In a controlled infection experiment, we used the three-spined stickleback fish, a model species for host-parasite studies, and their nematode parasite Camallanus lacustris. We showed that the levels of DNA methylation are higher in infected fish. Results furthermore suggest correlations between DNA methylation and shifts in key fitness and immune traits between infected and control fish, including respiratory burst and functional trans-generational traits such as the concentration of motile sperm. We revealed that genes associated with metabolic, developmental and regulatory processes (cell death and apoptosis) were differentially methylated between infected and control fish. Interestingly, genes such as the neuropeptide FF receptor 2 and the integrin alpha 1 as well as molecular pathways including the Th1 and Th2 cell differentiation were hypermethylated in infected fish, suggesting parasite-mediated repression mechanisms of immune responses. Altogether, we demonstrate that parasite infection contributes to genome-wide DNA methylation modifications. Our study brings novel insights into the evolution of vertebrate immunity and suggests that epigenetic mechanisms are complementary to genetic responses against parasite-mediated selection

Sex does not affect tail autotomy in lacertid lizards

Caudal autotomy is one of the most effective and widespread defensive mechanisms among lizards. When predators grasp the tail, lizards are able to shed it from the point of the attack and further. Numerous factors have been reported to affect tail-shedding performance such as temperature, age, predation pressure, intraspecific competition etc. Interestingly, the impact of sex on tail loss remains greatly understudied. Here, we analyzed tail autotomy performance, simulated in the lab, in 12 species of lacertid lizards belonging to five genera (Algyroides, Anatololacerta, Hellenolacerta, Ophisops, Podarcis). Our aim was to investigate whether sex affects caudal autotomy and/or the duration of post-autotomic tail movement. We failed to detect any effect of sex on tail loss in the species examined. Also, we did not find any sexual impact on the duration of tail movement after autotomy, with a single exception. Our findings suggest that autotomy serves as a defensive tactic equally in both sexes and is used in the same extent.

Dorsal_headshape_RWs_Runemark_et_al

Relative warps (RWs) reflecting dorsal head shape of individuals. These were obtained from the tpsRelw software. Population affinity of individuals is denoted by letter combinations as in Figure 1 in the manuscript and Geographic_locations_Runemark_et_al.tx

Geographic_locations_Runemark_et_al

A table of the geographic coordinates and population names

Data from: Ecological explanations to island gigantism: dietary niche divergence, predation and size in an endemic lizard

Although rapid evolution of body size on islands has long been known, the ecological mechanisms behind this island phenomenon remain poorly understood. Diet is an important selective pressure for morphological divergence. Here we investigate if selection for novel diets has contributed to the multiple independent cases of island gigantism in the Skyros wall lizard (Podarcis gaigeae) and if diet, predation, or both factors best explain island gigantism. We combined data on body size, shape, bite force, and realized and available diets to address this. Several lines of evidence suggest that diet has contributed to the island gigantism. The larger islet lizards have relatively wider heads and higher bite performance in relation to mainland lizards than would be expected from size differences alone. The proportions of consumed and available hard prey are higher on islets than mainland localities, and lizard body size is significantly correlated with the proportion of hard prey. Furthermore, the main axis of divergence in head shape is significantly correlated with dietary divergence. Finally, a model with only diet and one including diet and predation regime explain body size divergence equally well. Our results suggest that diet is an important ecological factor behind insular body size divergence, but could be consistent with an additional role for predation

SVL_headwidth_Runemark_et_al

Contains information on Snout-vent length and head width per individuals. Population affinity is denoted by the population codes from Figure 1 in the manuscript and Geographic_locations_Runemark_et_al.tx

README_Runemark_et_al

Readme file containing descriptions of the files deposited for this manuscrip

Realized_diet_composition_Runemark_et_al

Contains data on realized diet composition from fecal samples. Contains a table with the realized diet composition of the seven populations included in the study. The first column entitled 'population' includes the population abbreviations (D refers to Mesa Diavates; DII to Exo Diavates; L to Lakonisi; IA to Island of Atsitsa; AF to Agios Fokas; PA to Palamari; N to Nyfi) as illustrated in Figure 1 and given in Figure 3 in the manuscript, the second column denotes the habitat ('I' for islet or 'M' for mainland) and the third the sex of the individual. In the following columns we provide the 19 taxonomic prey categories and the number of each prey item found in the stomach of each individual

The castaway: characteristic islet features affect the ecology of the most isolated European lizard

The ecological importance of islet endemics are in the front line of conservation efforts and thus the good knowledge of their biology is required. Podarcis levendis is a lacertid lizard, endemic to two rocky islets in the Cretan Sea, Greece, that was raised to specific level in 2008 and since then no data on its biology are available. Here we present the first ecological information on the species, focusing on population density, tail autotomy and feeding preferences. We recorded regenerated and damaged tails in the field and estimated population density with the transect method. We also dissected museum specimens and analyzed their stomach content. Regenerated tails were common and reached a considerable 71%. The latter finding could be attributed to the intense intraspecific competition due to high population density but also to the seasonal predation pressure by migratory birds. The diet of P. levendis coincides with that of other insular congenerics, including high percentages of plant material