New Method for the Extrapolation of Finite-Size Data to Infinite Volume

We present a simple and powerful method for extrapolating finite-volume Monte Carlo data to infinite volume, based on finite-size-scaling theory. We discuss carefully its systematic and statistical errors, and we illustrate it using three examples: the two-dimensional three-state Potts antiferromagnet on the square lattice, and the two-dimensional $O(3)$ and $O(\infty)$ $\sigma$-models. In favorable cases it is possible to obtain reliable extrapolations (errors of a few percent) even when the correlation length is 1000 times larger than the lattice.Comment: 3 pages, 76358 bytes Postscript, contribution to Lattice '94; see also hep-lat/9409004, hep-lat/9405015 and hep-lat/941100

Penalized likelihood and multi-objective spatial scans for the detection and inference of irregular clusters

Background: Irregularly shaped spatial clusters are difficult to delineate. A cluster found by an algorithm often spreads through large portions of the map, impacting its geographical meaning. Penalized likelihood methods for Kulldorff's spatial scan statistics have been used to control the excessive freedom of the shape of clusters. Penalty functions based on cluster geometry and non-connectivity have been proposed recently. Another approach involves the use of a multi-objective algorithm to maximize two objectives: the spatial scan statistics and the geometric penalty function. Results & Discussion: We present a novel scan statistic algorithm employing a function based on the graph topology to penalize the presence of under-populated disconnection nodes in candidate clusters, the disconnection nodes cohesion function. A disconnection node is defined as a region within a cluster, such that its removal disconnects the cluster. By applying this function, the most geographically meaningful clusters are sifted through the immense set of possible irregularly shaped candidate cluster solutions. To evaluate the statistical significance of solutions for multi-objective scans, a statistical approach based on the concept of attainment function is used. In this paper we compared different penalized likelihoods employing the geometric and non-connectivity regularity functions and the novel disconnection nodes cohesion function. We also build multi-objective scans using those three functions and compare them with the previous penalized likelihood scans. An application is presented using comprehensive state-wide data for Chagas' disease in puerperal women in Minas Gerais state, Brazil. Conclusions: We show that, compared to the other single-objective algorithms, multi-objective scans present better performance, regarding power, sensitivity and positive predicted value. The multi-objective non-connectivity scan is faster and better suited for the detection of moderately irregularly shaped clusters. The multi-objective cohesion scan is most effective for the detection of highly irregularly shaped clusters

Aspergillus section Fumigati – Epidemiological trends: a perspective from a National Reference Laboratory

Aspergillus species have emerged as an important cause of life-threatening infections in immunocompromised patients. Aspergillus fumigatus is the most frequent agent of aspergillosis and reports on infections caused by this species or its siblings are becoming more frequent, together with the increasing number of at-risk patients. Nowadays, due to the rising concerns about emerging antifungal resistance, the epidemiological surveillance for clinical and environmental isolates is mandatory. The overall objective of the project is to understand the epidemiology of the Aspergillus isolates (species and antifungal resistance) collected in the Portuguese National Reference Laboratory through our surveillance system on Aspergillus.info:eu-repo/semantics/publishedVersio

Routine screening of harmful microorganisms in beach sands: implications to public health

Beaches worldwide provide recreational opportunities to hundreds of millions of people and serve as important components of coastal economies. Beach water is often monitored for microbiological quality to detect the presence of indicators of human sewage contamination so as to prevent public health outbreaks associated with water contact. However, growing evidence suggests that beach sand can harbor microbes harmful to human health, often in concentrations greater than the beach water. Currently, there are no standards for monitoring, sampling, analyzing, or managing beach sand quality. In addition to indicator microbes, growing evidence has identified pathogenic bacteria, viruses, and fungi in a variety of beach sands worldwide. The public health threat associated with these populations through direct and indirect contact is unknown because so little research has been conducted relating to health outcomes associated with sand quality. In this manuscript, we present the consensus findings of a workshop of experts convened in Lisbon, Portugal to discuss the current state of knowledge on beach sand microbiological quality and to develop suggestions for standardizing the evaluation of sand at coastal beaches. The expert group at the "Microareias 2012" workshop recommends that 1) beach sand should be screened for a variety of pathogens harmful to human health, and sand monitoring should then be initiated alongside regular water monitoring; 2) sampling and analysis protocols should be standardized to allow proper comparisons among beach locations; and 3) further studies are needed to estimate human health risk with exposure to contaminated beach sand. Much of the manuscript is focused on research specific to Portugal, but similar results have been found elsewhere, and the findings have worldwide implications

Routine screening of harmful microorganisms in beach sands: implications to public health

Beaches worldwide provide recreational opportunities to hundreds of millions of people and serve as important components of coastal economies. Beach water is often monitored for microbiological quality to detect the presence of indicators of human sewage contamination so as to prevent public health outbreaks associated with water contact. However, growing evidence suggests that beach sand can harbor microbes harmful to human health, often in concentrations greater than the beach water. Currently, there are no standards for monitoring, sampling, analyzing, or managing beach sand quality. In addition to indicator microbes, growing evidence has identified pathogenic bacteria, viruses, and fungi in a variety of beach sands worldwide. The public health threat associated with these populations through direct and indirect contact is unknown because so little research has been conducted relating to health outcomes associated with sand quality. In this manuscript, we present the consensus findings of a workshop of experts convened in Lisbon, Portugal to discuss the current state of knowledge on beach sand microbiological quality and to develop suggestions for standardizing the evaluation of sand at coastal beaches. The expert group at the "Microareias 2012" workshop recommends that 1) beach sand should be screened for a variety of pathogens harmful to human health, and sand monitoring should then be initiated alongside regular water monitoring; 2) sampling and analysis protocols should be standardized to allow proper comparisons among beach locations; and 3) further studies are needed to estimate human health risk with exposure to contaminated beach sand. Much of the manuscript is focused on research specific to Portugal, but similar results have been found elsewhere, and the findings have worldwide implications

Dynamics of early establishment of SARS-CoV-2 VOC Omicron lineages in Minas Gerais, Brazil

Brazil is one of the nations most affected by Coronavirus disease 2019 (COVID-19). The introduction and establishment of new virus variants can be related to an increase in cases and fatalities. The emergence of Omicron, the most modified SARS-CoV-2 variant, caused alarm for the public health of Brazil. In this study, we examined the effects of the Omicron introduction in Minas Gerais (MG), the second-most populous state of Brazil. A total of 430 Severe Acute Respiratory Syndrome Coronavirus 2 (SARS-CoV-2) samples from November 2021 to June 2022 from Belo Horizonte (BH) city were sequenced. These newly sequenced genomes comprise 72% of all previously available SARS-CoV-2 genomes for the city. Evolutionary analysis of novel viral genomes reveals that a great diversity of Omicron sublineages have circulated in BH, a pattern in-keeping with observations across Brazil more generally. Bayesian phylogeographic reconstructions indicate that this diversity is a product of a large number of international and national importations. As observed previously, São Paulo state is shown as a significant hub for viral spread throughout the country, contributing to around 70% of all viral Omicron introductions detected in MG

Characterization of macrofauna associated with articulated calcareous algae (Corallinaceae, rhodophyta) occurring in a hydrodynamic gradient on the espírito santo state coast, brazil

The aims of this study were to characterize the macrofauna associated with the articulated calcareous algae occurring on a hydrodynamic gradient off the Vitória metropolitan area, Espírito Santo State, Brazil, and to describe its temporal distribution. Physicochemical variables were measured in situ, and samples of sediment, water and phytal were taken from three sites along the coast in August and November 2005 (winter and spring, respectively) and in February and May 2006 (summer and fall, respectively). Twenty random samples were taken from the rocky surface in the lower midlittoral zone at each site, each season. Six species of articulated algae harboring 9,651 animal specimens distributed among 189 taxa were collected. The dominant taxonomic groups were Mollusca, Polychaeta and Crustacea. The main patterns revealed by statistical analysis related to differences in the abundance and richness at the sample sites, as well as to the correlation between the physicochemical variables and community distance matrices, indicating the importance of the physicochemical variables in the differentiation of the communities. Results also indicated that the variable which most influenced the physicochemical and community properties was the hydrodynamic character of the sites: a high level of hydrodynamism resulting in the calcareous algae´s sheltering a lower abundance and diversity of animal species than a lower level one.Os objetivos deste estudo foram caracterizar a macrofauna associada às algas calcárias articuladas num gradiente de hidrodinamismo no litoral da região metropolitana de Vitória, Espírito Santo, Brasil, e descrever a distribuição temporal. Variáveis fisicoquímicas foram medidas in situ, e amostras do sedimento, água e fital foram feitas em três pontos amostrais do litoral em agosto e novembro de 2005 (inverno e primavera, respectivamente) e fevereiro e maio de 2006 (verão e outono, respectivamente). Em cada ponto, e por estação do ano, foram obtidas 20 amostras aleatórias da superfície do costão rochoso na região do mediolitoral inferior. Seis espécies de algas calcárias articuladas foram coletadas e abrigaram 9.651 espécimes animais distribuídos em 189 táxons. Os grupos taxonômicos dominantes foram Mollusca, Polychaeta e Crustacea. Os principais padrões revelados pelas análises estatísticas foram diferenças na abundância e riqueza entre os pontos amostrais e correlação entre as variáveis fisicoquímicas e a comunidade, indicando que os parâmetros fisicoquímicos foram importantes para a caracterização destas. Os resultados indicaram ainda que a variável que mais influenciou as propriedades fisicoquímicas e da comunidade foi o grau de hidrodinamismo: locais com hidrodinamismo elevado permitem que algas calcárias abriguem uma menor abundância e diversidade de espécies animais do que locais com hidrodinamismo elevado

Cork : properties, capabilities and applications

Cork is a natural, renewable, sustainable raw material that has been used for many centuries. As a result of this very long term interest, the scientific literature on cork is extensive. The present review focuses on the chemical composition, physical and mechanical properties of cork and on its products and sub-products. The substantial efforts to fully characterise cork, as well as new developments and evolving research, are reviewed, beginning with its histology, growth and morphology (at macro- and microscales). The chemical structure is analysed in detail, covering both the materials that form the wall structure and the low molecular weight, extractable components. The unique properties of cork are discussed and correlated with current knowledge on morphology and chemical structure. Finally, the important industrial applications of cork are reviewed, in the context of research to provide cork with novel, high added-value applications