Morphology, molecular phylogeny and okadaic acid production of epibenthic Prorocentrum (Dinophyceae) species from the northern South China Sea

Around 30 epibenthic Prorocentrum species have been described, but information about their biogeography is limited. Some species are able to produce okadaic acid (OA) and its derivatives, which are responsible for diarrheic shellfish poisoning (DSP). In the present study, we examined the diversity of epibenthic Prorocentrum in the northern South China Sea by isolating single cells from sand, coral, and macroalgal samples collected from 2012 to 2015. Their morphology was examined using light microscopy and scanning electron microscopy. Among 47 Prorocentrum strains, seven morphospecies were identified as P. lima, P. rhathymum, P. concavum, P. cf. emarginatum, P. fukuyoi, P. cf. maculosum and P. panamense. The latter five species have not been previously reported in Chinese waters, and this is the first record of P. panamense outside its type locality. Partial large subunit (LSU) ribosomal DNA and internal transcribed spacer region sequences were obtained and molecular phylogenetic analysis was carried out using maximum likelihood and Bayesian inference. Chinese P. cf. maculosum strains share 99.5% similarity of LSU sequences with the strain from Cuba (close to the type locality), but Chinese P. lima strains share only 96.7% similarity of LSU sequences with the strain from the type locality. P. cf. emarginatum differs from P. fukuyoi mainly in the presence/absence of marginal pores and they form a well-resolved clade together with P. sculptile. OA was detected in all Chinese strains of P. lima and P. cf. maculosum based on liquid chromatography-mass spectrometry analysis, but dinophysistoxin was produced only by two P. lima strains. Chinese strains of P. concavum, P. rhathymum, and P. panamense do not produce detectable level of OA. Our results support the wide distribution of epibenthic Prorocentrum species and highlight the potential risk of DSP in the northern South China Sea

Ecological studies of phytoplankton and harmful algal blooms in Junk Bay, Hong Kong

published_or_final_versionEcology and BiodiversityDoctoralDoctor of Philosoph

(E)-Methyl 3-(3,5-dibromo-2-hydroxybenzylidene)carbazate

The title compound, C9H8Br2N2O3, crystallizes with two very similar independent molecules in the asymmetric unit, each of which adopts a trans configuration with respect to the C=N bond. Intramolecular O—H...N hydrogen bonds are observed in each independent molecule. In the crystal structure, molecules are linked into chains propagating along [010] by N—H...O and C—H...O hydrogen bonds. In addition, C—H...π interactions stabilize the structure

Phytoplankton pigments and functional community structure in relation to environmental factors in the Pearl River Estuary

Two cruises were undertaken in the Pearl River Estuary in November 2011 and March 2012 to analyze the distribution of phytoplankton pigments and to define the relationships of pigment indices and functional community structure with environmental factors. Among 22 pigments, 17 were detected by high-performance liquid chromatography. Chlorophyll a was found in all samples, with a maximum of 7.712 μg L−1 in spring. Fucoxanthin was the most abundant accessory pigment, with mean concentrations of 2.914 μg L−1 and 0.207 μg L−1 in spring and autumn, respectively. Chlorophyll a, chlorophyll c2, fucoxanthin, diadinoxanthin, and diatoxanthin were high in the northern or northwest estuary in spring and in the middle-eastern and northeast estuary in autumn. Chlorophyll b, chlorophyll c3, prasinoxanthin, and peridinin were similarly distributed during the two cruises. Chlorophyll a and fucoxanthin positively correlated with nutrients in spring, whereas 19′-hex-fucoxanthin and 19′-but-fucoxanthin negatively correlated. The biomass proportion of microphytoplankton (BPm) was higher in spring, whereas that of picophytoplankton (BPp) was higher in autumn. BPm in spring was high in areas with salinity <30, but BPp and the biomass proportion of nanophytoplankton (BPn) were high in areas with salinity >30. BPm increased but BPn reduced with the increase in nutrient contents. By comparison, BPp reduced with the increase in nutrient contents in spring, but no relationship was found between BPp and nutrient contents in autumn. The ratios of photosynthetic carotenoids to photoprotective carotenoids in the southern estuary approached unity linear relationship in spring and were under the unity line in autumn

Antagonist Muscle Prefatigue Increases the Intracortical Communication between Contralateral Motor Cortices during Elbow Extension Contraction

To investigate the cortico-cortical coupling changes related to antagonist muscle prefatigue, we recorded EEG at FC3, C3, FC4, and C4 electrodes of twelve young male volunteers during a 30-second-long, nonfatiguing isometric elbow extension contraction with a target force level of 20% MVC before and after a sustained fatiguing elbow flexion contraction until task failure. EEG-EEG phase synchronization indices in alpha and beta frequency bands were calculated for the pre- and postfatigue elbow extension contractions. The phase synchronization index in the beta frequency band was found significantly increased between EEG of FC3-C3. The increased phase synchronization index may reflect an enhanced intracortical communication or integration of the signals between contralateral motor cortices with antagonist muscle prefatigue, which may be related to the central modulation so as to compensate for the antagonist muscle prefatigue-induced joint instability

The First Complete Mitochondrial Genome of the Flathead Cociella crocodilus (Scorpaeniformes: Platycephalidae) and the Phylogenetic Relationships within Scorpaeniformes Based on Whole Mitogenomes

Complete mitochondrial genomes (mitogenomes) are important molecular markers for understanding the phylogenetics of various species. Although recent studies on the mitogenomes of the Scorpaeniformes species have been greatly advanced, information regarding molecular studies and the taxonomic localization of Platycephalidae is still sparse. To further analyze the phylogeny of Platycephalidae, we sequenced the complete mitogenome of Cociella crocodilus of the Platycephalidae family within Scorpaeniformes for the first time. The mitogenome was 17,314 bp in length, contained two ribosomal RNA genes (rRNAs), 22 transfer RNA genes (tRNAs), 13 protein-coding genes (PCGs), and two typical noncoding control regions (the control region (CR) and origin of the light strand (OL)). All PCGs used standard initiation codons ATG, apart from cox1. The majority of the tRNA genes could be folded into cloverleaf secondary structures, whereas the secondary structure of tRNASer (AGN) lacked a dihydrouridine (DHU) stem. The CR contained several conserved sequence blocks (CSBs) and eight tandem repeats. In addition, the phylogenetic relationship based on the concatenated nucleotides sequences of 13 PCGs indicated that the Platycephalidae species are relatively basal in the phylogenetic relationships of Scorpaeniformes. Our results may not only advance the origin and the evolution of Scorpaeniformes, but also provide information for the genetic evolution and taxonomy of the teleostean species

Mitochondrial genome of the garfish Hyporhamphus quoyi (Beloniformes: Hemiramphidae) and phylogenetic relationships within Beloniformes based on whole mitogenomes.

Mitochondrial DNA (mtDNA) can provide genome-level information (e.g. mitochondrial genome structure, phylogenetic relationships and codon usage) for analyzing molecular phylogeny and evolution of teleostean species. The species in the order Beloniformes have commercial importance in recreational fisheries. In order to further clarify the phylogenetic relationship of these important species, we determined the complete mitochondrial genome (mitogenome) of garfish Hyporhamphus quoyi of Hemiramphidae within Beloniformes. The mitogenome was 16,524 bp long and was typical of other teleosts mitogenomes in size and content. Thirteen PCGs started with the typical ATG codon (with exception of the cytochrome coxidase subunit 1 (cox1) gene with GTG). All tRNA sequences could be folded into expected cloverleaf secondary structures except for tRNASer (AGN) which lost a dihydrouracil (DHU) stem. The control region was 866 bp in length, which contained some conserved sequence blocks (CSBs) common to Beloniformes. The phylogenetic relationship between 26 fish Beloniformes species was analyzed based on the complete nucleotide and amino acid sequences of 13 PCGs by two different inference methods (Maximum Likelihood and Bayesian Inference). Phylogenetic analyses revealed Hemiramphidae as the sister group to Exocoetidae and it is a paraphyletic grouping. Our results may provide useful information on mitogenome evolution of teleostean species