Thermodynamic scaling of diffusion in supercooled Lennard-Jones liquids

The manner in which the intermolecular potential u(r) governs structural relaxation in liquids is a long standing problem in condensed matter physics. Herein we show that diffusion coefficients for simulated Lennard-Jones m-6 liquids (8<m<36) in normal and moderately supercooled states are a unique function of the variable rho^g/T, where rho is density and T is temperature. The scaling exponent g is a material specific constant whose magnitude is related to the steepness of the repulsive part of u(r), evaluated around the distance of closest approach between particles probed in the supercooled regime. Approximations of u(r) in terms of inverse power laws are also discussed.Comment: 4 pages, 3 figure

Density Scaling and Dynamic Correlations in Viscous Liquids

We use a recently proposed method [Berthier L.; Biroli G.; Bouchaud J.P.; Cipelletti L.; El Masri D.; L'Hote D.; Ladieu F.; Pierno M. Science 2005, 310, 1797.] to obtain an approximation to the 4-point dynamic correlation function from derivatives of the linear dielectric response function. For four liquids over a range of pressures, we find that the number of dynamically correlated molecules, Nc, depends only on the magnitude of the relaxation time, independently of temperature and pressure. This result is consistent with the invariance of the shape of the relaxation dispersion at constant relaxation time and the density scaling property of the relaxation times, and implies that Nc also conforms to the same scaling behavior. For propylene carbonate and salol Nc becomes constant with approach to the Arrhenius regime, consistent with the value of unity expected for intermolecularly non-cooperative relaxation.Comment: revisio

Molecular dynamics simulations of the Johari-Goldstein relaxation in a molecular liquid

Molecular dynamics simulations (mds) were carried out to investigate the reorientational motion of a rigid (fixed bond length), asymmetric diatomic molecule in the liquid and glassy states. In the latter the molecule reorients via large-angle jumps, which we identify with the Johari-Goldstein (JG) dynamics. This relaxation process has a broad distribution of relaxation times, and at least deeply in the glass state, the mobility of a given molecule remains fixed over time; that is, there is no dynamic exchange among molecules. Interestingly, the JG relaxation time for a molecule does not depend on the local density, although the non-ergodicity factor is weakly correlated with the packing efficiency of neighboring molecules. In the liquid state the frequency of the JG process increases significantly, eventually subsuming the slower alpha-relaxation. This evolution of the JG-motion into structural relaxation underlies the correlation of many properties of the JG- and alpha-dynamics.Comment: 12 pages, 6 figure

Rural and Small Town Employment: Structure by Industry

Community/Rural/Urban Development, Labor and Human Capital,

Adaptively Biased Molecular Dynamics for Free Energy Calculations

We present an Adaptively Biased Molecular Dynamics (ABMD) method for the computation of the free energy surface of a reaction coordinate using non-equilibrium dynamics. The ABMD method belongs to the general category of umbrella sampling methods with an evolving biasing potential, and is inspired by the metadynamics method. The ABMD method has several useful features, including a small number of control parameters, and an $O(t)$ numerical cost with molecular dynamics time $t$. The ABMD method naturally allows for extensions based on multiple walkers and replica exchange, where different replicas can have different temperatures and/or collective variables. This is beneficial not only in terms of the speed and accuracy of a calculation, but also in terms of the amount of useful information that may be obtained from a given simulation. The workings of the ABMD method are illustrated via a study of the folding of the Ace-GGPGGG-Nme peptide in a gaseous and solvated environment.Comment: Revised version to appear in Journal of Chemical Physic