Screening of potential donors for anaerobic stress tolerance during germination in rice

The rising cost of transplanting rice has made direct seeding an affordable alternative for rice establishment, particularly in Africa. However, direct seeding, while cost-effective, faces crop establishment challenges due to flooding. Uncontrolled water, driven by erratic rains in low-lying areas or uneven fields, limit germination. Rice possesses the unique ability of anaerobic germination, enabling it to sprout and emerge in oxygen-deprived conditions. Understanding rice’s response to anaerobic stress during germination is crucial for resilience breeding. Africa, although relying on direct seeding, has made limited progress in addressing flooding during germination compared to Asia. Anaerobic stress tolerance ensures successful crop emergence even in oxygen-limited environments and can help suppress weeds, a significant challenge in direct-seeded rice cultivation. This study aims to contribute by screening for potential rice donors exhibiting anaerobic stress tolerance. We screened 200 rice genotypes at Sokoine University of Agriculture (SUA) in Morogoro, Tanzania, primarily focusing on landraces with untapped potential. Using an alpha lattice design, we conducted two anaerobic experiments in September and October 2022, adding 7 cm of standing water immediately after dry seeding for flooded and maintaining a 2 cm water level after germination in the control for duration of 21 days. We identified potential donors based on selection index computed from genomic estimated breeding values (GEBVs) using eight variables: germination at 14 DAS, germination at 21 DAS, seedling height at 14 DAS, seedling height at 21 DAS, shoot dry matter at 21 DAS, root dry matter at 21 DAS, culm diameter at 21 DAS, and root length at 21DAS. Ten genotypes emerged as the most promising, exhibiting at least 70% germination in floodwater at 21 DAS and greater selection indices. These genotypes were like: Afaa Mwanza 1/159, Rojomena 271/10, Kubwa Jinga, Wahiwahi, Magongo ya Wayungu, Mpaka wa Bibi, Mwangaza, Tarabinzona, IB126-Bug 2013A, and Kanamalia with respective percentages of 75, 74, 71, 86, 75, 80, 71, 80, 70, and 73. These findings contribute to global efforts to mitigate the impacts of flooding during germination. These donors, will be potential to enrich the gene pool for anaerobic germination, providing valuable resources for breeding for flooding tolerance

Flood-tolerant rice for enhanced production and livelihood of smallholder farmers of Africa

Climate change has intensified food security challenges, especially in Africa, where a significant portion of produce is reliant on smallholder farmers in rainfed conditions. Prolonged flooding and droughts, driven by erratic weather patterns, have significantly elevated the risk of food scarcity. Floods, in particular, have been responsible for severe crop losses, raising concerns about increasing import costs if this issue is not mitigated. Africa is actively working to mitigate the impacts of flooding and enhance food security, although progress has been gradual. Developing flood-resilient varieties is a promising strategy to address this challenge. We explored various flood types common in the region and observed a scarcity of research on flood-resilient varieties, particularly those adapted for anaerobic germination and stagnant flooding. Conversely, varieties bred for flash flooding, such as FARO 66 and FARO 67, have seen limited distribution, primarily confined to a few West African countries, falling short of the intended impact. In contrast, deepwater tolerance research dates back to the early 1900s, but commercialization of the varieties remains limited, with scarce information regarding their cultivation, coverage, and performance. Newly developed varieties, such as Kolondieba 2 and Kadia 24, have received less attention, leaving many farmers dependent on locally adapted cultivars specific to particular areas. Remarkably, despite the limited information, both released and local stress-tolerant cultivars exhibit substantial survival rates and yield advantages. For instance, FARO 66 and FARO 67 have demonstrated 1–3 t/ha yield advantages over recurrent parents under flooding stress. Nonetheless, further efforts are required to address various forms of flooding. To this end, AfricaRice collaborates with National Rice Development Strategies, IRRI, and other partners to promote research and development. While improved flood-tolerant varieties remain limited in scope across Africa, the financial gains for farmers are significant when compared to susceptible cultivars. As the continent’s population continues to grow rapidly, there is untapped potential in African germplasms, making ongoing research and breeding strategies essential. Therefore, this review highlights the importance of intensifying efforts in screening and identifying flood-tolerant rice. Furthermore, it underscores the value of utilizing traditional flood-resilient cultivars in breeding to enhance the productivity of widely distributed and cultivated varieties