32 research outputs found

    Generalized Framework and Algorithms for Illustrative Visualization of Time-Varying Data on Unstructured Meshes

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    Photo- and physically-realistic techniques are often insufficient for visualization of simulation results, especially for 3D and time-varying datasets. Substantial research efforts have been dedicated to the development of non-photorealistic and illustration-inspired visualization techniques for compact and intuitive presentation of such complex datasets. While these efforts have yielded valuable visualization results, a great deal of work has been reproduced in studies as individual research groups often develop purpose-built platforms. Additionally, interoperability between illustrative visualization software is limited due to specialized processing and rendering architectures employed in different studies. In this investigation, a generalized framework for illustrative visualization is proposed, and implemented in marmotViz, a ParaView plugin, enabling its use on variety of computing platforms with various data file formats and mesh geometries. Detailed descriptions of the region-of-interest identification and feature-tracking algorithms incorporated into this tool are provided. Additionally, implementations of multiple illustrative effect algorithms are presented to demonstrate the use and flexibility of this framework. By providing a framework and useful underlying functionality, the marmotViz tool can act as a springboard for future research in the field of illustrative visualization

    The “invisible cholecystectomy”: A transumbilical laparoscopic operation without a scar

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    Background Looking to further reduce the operative trauma of laparoscopic cholecystectomy, we developed, in patients with no history of cholecystitis and a normal BMI, a scarless operation through the umbilicus. The operative technique, along with the results of the first 10 patients operated in this way, are fully described. Methods 10 female patients underwent transumbilical scarless laparoscopic cholecystectomy. Through the umbilicus, two trocars of 5 mm were introduced parallel to another with a bridge of fascia between them (one for the 5-mm laparoscope and the other for the grasper). With the help of one 1-mm Kirschner wire, introduced at the subcostal line and bent with a special designed device, the gallbladder was pulled up and the triangle of Callot was dissected free, clipped, cut, and the gallbladder was subsequently resected. Finally the gallbladder was taken out through the umbilicus and the umbilicus reconstructed. Results 10 female patients, mean age 36 years (range: 31–49), mean body mass index (BMI) 23 (range: 20–26), after one attack (six patients) or a second attack (four patients) and cholelithiasis confirmed by ultrasonography with no suspicion of inflammation were included in this preliminary study. Mean operative time was 70 minutes (range: 65–85) with no conversions; hospital stay was less than 24 hours with no complications. Conclusion Looking to reduce operative trauma and improve the cosmetic result following laparoscopic cholecystectomy, a transumbilical operative technique has been developed. Results of the operative procedure in a selected group of patients are encouraging with no signs of inflammation and normal BMI. The umbilicus can be developed as a natural port for performing various operative procedures with the help of the traction produced by thin Kirschner wires

    The Evolutionary Origin of Man Can Be Traced in the Layers of Defunct Ancestral Alpha Satellites Flanking the Active Centromeres of Human Chromosomes

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    Alpha satellite domains that currently function as centromeres of human chromosomes are flanked by layers of older alpha satellite, thought to contain dead centromeres of primate progenitors, which lost their function and the ability to homogenize satellite repeats, upon appearance of a new centromere. Using cladistic analysis of alpha satellite monomers, we elucidated complete layer patterns on chromosomes 8, 17, and X and related them to each other and to primate alpha satellites. We show that discrete and chronologically ordered alpha satellite layers are partially symmetrical around an active centromere and their succession is partially shared in non-homologous chromosomes. The layer structure forms a visual representation of the human evolutionary lineage with layers corresponding to ancestors of living primates and to entirely fossil taxa. Surprisingly, phylogenetic comparisons suggest that alpha satellite arrays went through periods of unusual hypermutability after they became “dead” centromeres. The layer structure supports a model of centromere evolution where new variants of a satellite repeat expanded periodically in the genome by rounds of inter-chromosomal transfer/amplification. Each wave of expansion covered all or many chromosomes and corresponded to a new primate taxon. Complete elucidation of the alpha satellite phylogenetic record would give a unique opportunity to number and locate the positions of major extinct taxa in relation to human ancestors shared with extant primates. If applicable to other satellites in non-primate taxa, analysis of centromeric layers could become an invaluable tool for phylogenetic studies

    Single-pressure absorption refrigeration systems for low-source-temperature applications

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    The diffusion absorption refrigeration (DAR) cycle is a promising technology for fully thermally driven cooling. It is well suited to applications in medicine refrigeration and air-conditioning in off-grid settings. However, design and engineering knowhow for the technology is limited; therefore, system development has historically been an iterative and expensive process. Additionally, conventional system designs require high-grade energy input for operation, and are unsuitable for low-temperature solar- or waste-heat activated applications. In the present effort, component- and system-level DAR engineering analyses are performed. Detailed bubble-pump generator (BPG) component models are developed, and are validated experimentally and with direct simulations. Investigations into the BPG focus on the Taylor flow pattern in the intermediate Bond number regime, which has not yet been thoroughly characterized in the literature, and has numerous industry applications, including nuclear fuel processing and well dewatering. A coupling-fluid heated BPG design is also investigated experimentally for low-source-temperature operation. Phase-change simulation methodologies are developed to rigorously study the continuously developing flow pattern in this BPG configuration. Detailed component-level models are also formulated for all of the other DAR heat and mass exchangers, and are integrated to yield a complete system-level model. Results from these modeling studies are applied to develop a novel fully passive low-source-temperature (110 - 130°C) DAR system that delivers refrigeration grade cooling. This design achieves operation at target conditions through the use of alternate working fluids (NH3-NaSCN-He), the coupling-fluid heated BPG, and a novel absorber configuration. The complete DAR system is demonstrated experimentally, and evaluated over a range of operating conditions. Experimental results are applied to assess and refine component- and system- level models.Ph.D

    interThermalPhaseChangeFoam—A framework for two-phase flow simulations with thermally driven phase change

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    The volume-of-fluid (VOF) approach is a mature technique for simulating two-phase flows. However, VOF simulation of phase-change heat transfer is still in its infancy. Multiple closure formulations have been proposed in the literature, each suited to different applications. While these have enabled significant research advances, few implementations are publicly available, actively maintained, or inter-operable. Here, a VOF solver is presented (interThermalPhaseChangeFoam), which incorporates an extensible framework for phase-change heat transfer modeling, enabling simulation of diverse phenomena in a single environment. The solver employs object oriented OpenFOAM library features, including Run-Time-Type-Identification to enable rapid implementation and run-time selection of phase change and surface tension force models. The solver is packaged with multiple phase change and surface tension closure models, adapted and refined from earlier studies. This code has previously been applied to study wavy film condensation, Taylor flow evaporation, nucleate boiling, and dropwise condensation. Tutorial cases are provided for simulation of horizontal film condensation, smooth and wavy falling film condensation, nucleate boiling, and bubble condensation. Validation and grid sensitivity studies, interfacial transport models, effects of spurious currents from surface tension models, effects of artificial heat transfer due to numerical factors, and parallel scaling performance are described in detail in the Supplemental Material (see Appendix A). By incorporating the framework and demonstration cases into a single environment, users can rapidly apply the solver to study phase-change processes of interest. Keywords: Phase change, Condensation, Evaporation, Volume of flui

    Dynamic Model for Small-Scale Ammonia-Water Absorption Chiller

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    Optimization of the performance of absorption systems during transient operations such as start-up and shut-down to minimize lifetime costs is particularly important for small-capacity chillers and heat pumps. Most dynamic models in the literature have analyzed the transient response for a step change in a single parameter, but few have explored entire start-up and shut-down processes and control strategies. An accurate and robust model for simulating the transient behavior of an absorption chiller was developed here. The individual heat exchangers in the absorption system were analyzed using detailed segmental models. In components with significant mass transfer effects, reduced-order models are employed to decrease computational costs while also maintaining accurate system responses. System parameters such as heat exchanger size, solution flow rates, coupling fluid temperatures and flow rates used in the model are representative of a practical absorption chiller under development by the authors. This analysis can be used to minimize start-up times and also enhance steady state performance. The model can also be used for devising and testing control strategies in commercial applications
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