17 research outputs found
Ab initio Hartree-Fock Investigation of 2-Methylindole-3-acetic Acid
The potential energy surface (PES) of 2-methylindole-3-acetic acid (2-Me-IAA) has been investigated via RHF/6-31G* and RHF/6-31++G** calculations. With both basis sets, only three symmetry unique local minima with syn orientation of the COOH group are contained in the PES. A network of reaction paths connects these energy minima. One symmetry unique energy minimum has an extremely low barrier to the adjacent global minimum. Comparison with unsubstituted IAA and its alkylated as well as halogenated derivatives substituted at positions 4, 5, 6, and 7 shows that the PES of 2-Me-IAA is quite different. This is in accord with its significantly lower auxin activity and weaker binding to auxin binding protein 1 (ABP1)
Combined Ab initio SCF and Molecular Mechanics Studies of Propionic and Isobutyric Acids and Their Indole Derivatives Related to the Phytohormone Auxin (Indole-3-acetic Acid)
Detailed conformational analyses of propionic and isobutyric acids were performed to contribute to a better understanding of the stereochemical characteristics of biologically active indole-3-aliphatic acids. The studies are based on ab initio SCF (RHF/6-31G*) and molecular mechanics (force fields used: MM2, MM3, CFF91, AMBER, CVFF, ESFF) methods. The results obtained with the CFF91 and MM3 force fields revealed the best agreement with the experimental values and those from ab initio calculations. Normal mode frequencies in the harmonic oscillator approximation were calculated for the geometry optimized conformers with Cs symmetry of these compounds as well as of indole-3-acetic acid (IAA) and some of its biologically important derivatives (4-Cl-IAA, 6-Cl-IAA, 7-Cl-IAA, 4-Me-IAA) and indole-3-isobutyric acid (IIBA). The influence of the indole ring on the C=O and OāH stretching frequencies was analyzed. A small decrease of the C=O frequency was determined in the indole-3-acetic acid derivatives and a larger one in indole-3-isobutyric acid
Theoretical Investigation of the Neutral/Zwitterionic Equilibrium of Ī³-Aminobutyric Acid (GABA) Conformers in Aqueous Solution
Preface
Proceedings of the International Symposium Symmetries in Science XVIII (1 ed., Vol. 1612)Depto. de Ćlgebra, GeometrĆa y TopologĆaFac. de Ciencias MatemĆ”ticasTRUEpu