Variable allele frequency threshold

The present invention relates to monitoring a patient's response to therapy. In order to improve the monitoring of a patient's response to therapy, a method is provided to set a plurality of allele frequency thresholds to accounting for variations among tumours and patients. As the multiple allele frequency thresholds take into account differences between genes, single-nucleotide polymorphisms (SNPs), and/or patients, the multiple allele frequency thresholds may provide significant value to improve personalized therapy selection, disease surveillance, and monitoring to improve patient outcomes

Implications of the search for optical counterparts during the second part of the Advanced LIGO's and Advanced Virgo's third observing run: lessons learned for future follow-up observations

Joint multimessenger observations with gravitational waves and electromagnetic (EM) data offer new insights into the astrophysical studies of compact objects. The third Advanced LIGO and Advanced Virgo observing run began on 2019 April 1; during the 11 months of observation, there have been 14 compact binary systems candidates for which at least one component is potentially a neutron star. Although intensive follow-up campaigns involving tens of ground and space-based observatories searched for counterparts, no EM counterpart has been detected. Following on a previous study of the first six months of the campaign, we present in this paper the next five months of the campaign from 2019 October to 2020 March. We highlight two neutron star-black hole candidates (S191205ah and S200105ae), two binary neutron star candidates (S191213g and S200213t), and a binary merger with a possible neutron star and a 'MassGap' component, S200115j. Assuming that the gravitational-wave (GW) candidates are of astrophysical origin and their location was covered by optical telescopes, we derive possible constraints on the matter ejected during the events based on the non-detection of counterparts. We find that the follow-up observations during the second half of the third observing run did not meet the necessary sensitivity to constrain the source properties of the potential GW candidate. Consequently, we suggest that different strategies have to be used to allow a better usage of the available telescope time. We examine different choices for follow-up surveys to optimize sky localization coverage versus observational depth to understand the likelihood of counterpart detection

7 T renal MRI: challenges and promises

The progression to 7 Tesla (7 T) magnetic resonance imaging (MRI) yields promises of substantial increase in signal-to-noise (SNR) ratio. This increase can be traded off to increase image spatial resolution or to decrease acquisition time. However, renal 7 T MRI remains challenging due to inhomogeneity of the radiofrequency field and due to specific absorption rate (SAR) constraints. A number of studies has been published in the field of renal 7 T imaging. While the focus initially was on anatomic imaging and renal MR angiography, later studies have explored renal functional imaging. Although anatomic imaging remains somewhat limited by inhomogeneous excitation and SAR constraints, functional imaging results are promising. The increased SNR at 7 T has been particularly advantageous for blood oxygen level-dependent and arterial spin labelling MRI, as well as sodium MR imaging, thanks to changes in field-strength-dependent magnetic properties. Here, we provide an overview of the currently available literature on renal 7 T MRI. In addition, we provide a brief overview of challenges and opportunities in renal 7 T MR imaging

Myeloid cells promote interferon signaling-associated deterioration of the hematopoietic system

Innate and adaptive immune cells participate in the homeostatic regulation of hematopoietic stem cells (HSCs). Here, we interrogate the contribution of myeloid cells, the most abundant cell type in the mammalian bone marrow, in a clinically relevant mouse model of neutropenia. Long-term genetic depletion of neutrophils and eosinophils results in activation of multipotent progenitors but preservation of HSCs. Depletion of myeloid cells abrogates HSC expansion, loss of serial repopulation and lymphoid reconstitution capacity and remodeling of HSC niches, features previously associated with hematopoietic aging. This is associated with mitigation of interferon signaling in both HSCs and their niches via reduction of NK cell number and activation. These data implicate myeloid cells in the functional decline of hematopoiesis, associated with activation of interferon signaling via a putative neutrophil-NK cell axis. Innate immunity may thus come at the cost of system deterioration through enhanced chronic inflammatory signaling to stem cells and their niches