86 research outputs found

    Sequence analysis and molecular characterization of the temperate lactococcal bacteriophage r1t

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    The temperate lactococcal bacteriophage r1t was isolated from its lysogenic host and its genome was subjected to nucleotide sequence analysis. The linear r1t genome is composed of 33 350 bp and was shown to possess 3' staggered cohesive ends. Fifty open reading frames (ORFs) were identified which are, probably, organized in a life-cycle-specific manner, Nucleotide sequence comparisons, N-terminal amino acid sequencing and functional analyses enabled the assignment of possible functions to a number of DNA sequences and ORFs. In this way, ORFs specifying regulatory proteins, proteins involved in DNA replication, structural proteins, a holin, a lysin, an integrase, and a dUTPase were putatively identified. One ORF seems to be contained within a self-splicing group I intron. In addition, the bacteriophage att site required for site-specific integration into the host chromosome was determined

    INSITU LOCALIZATION OF SPECIFIC RNAS IN DEVELOPING FRUIT BODIES OF THE BASIDIOMYCETE SCHIZOPHYLLUM-COMMUNE

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    cDNA clones representing mRNAs abundantly expressed during fruiting ofSchizophyllum commune were used to detect the cellular localization of these mRNAs in freeze-microtome sections of developing fruit bodies. An 18 S rRNA clone was isolated and used as a probe for total RNA. Both RNA and DNA probes with different labels were found suitable but the procedure finally adopted involvedin situ hybridization with nick-translated biotinylated DNA probes. To permit the probes to permeate the cell walls it was necessary to treat the sections with RNasedepletedTrichoderma harzianum wall-lytic enzymes before hybridization. Hybridization at different developmental stages showed that the specific mRNAs were abundantly expressed in specific areas of the fruit bodie

    Regulation of spontaneous and TNF/IFN-induced IL-6 expression in two human ovarian-carcinoma cell lines

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    Autocrine and paracrine production of interleukin-6 (IL-6) is considered to be involved in the ongoing proliferation of ovarian-cancer cells. In view of the variability in IL-6 expression between various ovarian-cancer cells, we questioned whether differences in IL-6-gene regulation might be observed in ovarian tumor cells with and without IL-6 expression. The CAOV-3 cell line spontaneously secreted IL-6, which was enhanced by tumor necrosis factor-alpha (877 +/- 89 vs. 8,452 +/- 1,762 pg/ml, x +/- sd, p <0.01). The electrophoretic mobility shift assay (EMSA) demonstrated that basic IL-6 expression was associated with DNA binding of activator protein-1 (AP-1) and nuclear factor IL-6 (NF-IL6). Nuclear factor kappa-B (NF-kappa B), which consisted mainly of p65-NF-kappa B was induced in response to TNF-alpha stimulation. A2780 cells did not express IL-6, either spontaneously or after stimulation with TNF-alpha. EMSAs, showed spontaneous AP-1 but no NF-IL6 or NF-kappa B DNA binding. TNF-alpha stimulation enhanced AP-1 and induced NF-kappa B but no NF-IL6 DNA binding in these cells. NF-IL6 protein, however, was detected in nuclear extracts of these cells by Western blotting. In contrast, IL-6-promoter transfection studies showed no difference in promoter activation between CAOV-3 and A2780. This study reveals that differential IL-6-gene expression observed in ovarian cancer cell lines is independent of NF-IL6 activation. (C) 1999 Wiley-Liss, Inc

    Regulation of spontaneous and TNF/IFN-induced IL-6 expression in two human ovarian-carcinoma cell lines

    No full text
    Autocrine and paracrine production of interleukin-6 (IL-6) is considered to be involved in the ongoing proliferation of ovarian-cancer cells. In view of the variability in IL-6 expression between various ovarian-cancer cells, we questioned whether differences in IL-6-gene regulation might be observed in ovarian tumor cells with and without IL-6 expression. The CAOV-3 cell line spontaneously secreted IL-6, which was enhanced by tumor necrosis factor-alpha (877 +/- 89 vs. 8,452 +/- 1,762 pg/ml, x +/- sd, p <0.01). The electrophoretic mobility shift assay (EMSA) demonstrated that basic IL-6 expression was associated with DNA binding of activator protein-1 (AP-1) and nuclear factor IL-6 (NF-IL6). Nuclear factor kappa-B (NF-kappa B), which consisted mainly of p65-NF-kappa B was induced in response to TNF-alpha stimulation. A2780 cells did not express IL-6, either spontaneously or after stimulation with TNF-alpha. EMSAs, showed spontaneous AP-1 but no NF-IL6 or NF-kappa B DNA binding. TNF-alpha stimulation enhanced AP-1 and induced NF-kappa B but no NF-IL6 DNA binding in these cells. NF-IL6 protein, however, was detected in nuclear extracts of these cells by Western blotting. In contrast, IL-6-promoter transfection studies showed no difference in promoter activation between CAOV-3 and A2780. This study reveals that differential IL-6-gene expression observed in ovarian cancer cell lines is independent of NF-IL6 activation. (C) 1999 Wiley-Liss, Inc
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