51 research outputs found
Prediction of single‐nucleotide substitutions that result in exon skipping: identification of a splicing silencer in BRCA1
Estimates of new and total productivity in central Long Island Sound from in situ measurements of nitrate and dissolved oxygen
Author Posting. © The Author(s), 2013. This is the author's version of the work. It is posted here by permission of Springer for personal use, not for redistribution. The definitive version was published in Estuaries and Coasts 36 (2013): 74-97, doi:10.1007/s12237-012-9560-5.Biogeochemical cycles in estuaries are regulated by a diverse set of physical and
biological variables that operate over a variety of time scales. Using in situ optical sensors, we
conducted a high-frequency time-series study of several biogeochemical parameters at a mooring
in central Long Island Sound from May to August 2010. During this period, we documented
well-defined diel cycles in nitrate concentration that were correlated to dissolved oxygen, wind
stress, tidal mixing, and irradiance. By filtering the data to separate the nitrate time series into
various signal components, we estimated the amount of variation that could be ascribed to each
process. Primary production and surface wind stress explained 59% and 19%, respectively, of the
variation in nitrate concentrations. Less frequent physical forcings, including large-magnitude wind events and spring tides, served to decouple the relationship between oxygen, nitrate, and
sunlight on about one-quarter of study days. Daytime nitrate minima and dissolved oxygen
maxima occurred nearly simultaneously on the majority (> 80%) of days during the study period;
both were strongly correlated with the daily peak in irradiance. Nighttime nitrate maxima
reflected a pattern in which surface-layer stocks were depleted each afternoon and recharged the
following night. Changes in nitrate concentrations were used to generate daily estimates of new
primary production (182 ± 37 mg C m-2 d-1) and the f-ratio (0.25), i.e., the ratio of production
based on nitrate to total production. These estimates, the first of their kind in Long Island Sound,
were compared to values of community respiration, primary productivity, and net ecosystem
metabolism, which were derived from in situ measurements of oxygen concentration. Daily
averages of the three metabolic parameters were 1660 ± 431, 2080 ± 419, and 429 ± 203 mg C
m-2 d-1, respectively. While the system remained weakly autotrophic over the duration of the
study period, we observed very large day-to-day differences in the f-ratio and in the various
metabolic parameters.This work was supported by the Yale
Institute for Biospheric Studies, the Sounds Conservancy of the Quebec-Labrador Foundation,
and the Yale School of Forestry and Environmental Studies Carpenter-Sperry Fund.2014-01-0
Abundances of Iron-Binding Photosynthetic and Nitrogen-Fixing Proteins of Trichodesmium Both in Culture and In Situ from the North Atlantic
Marine cyanobacteria of the genus Trichodesmium occur throughout the oligotrophic tropical and subtropical oceans, where they can dominate the diazotrophic community in regions with high inputs of the trace metal iron (Fe). Iron is necessary for the functionality of enzymes involved in the processes of both photosynthesis and nitrogen fixation. We combined laboratory and field-based quantifications of the absolute concentrations of key enzymes involved in both photosynthesis and nitrogen fixation to determine how Trichodesmium allocates resources to these processes. We determined that protein level responses of Trichodesmium to iron-starvation involve down-regulation of the nitrogen fixation apparatus. In contrast, the photosynthetic apparatus is largely maintained, although re-arrangements do occur, including accumulation of the iron-stress-induced chlorophyll-binding protein IsiA. Data from natural populations of Trichodesmium spp. collected in the North Atlantic demonstrated a protein profile similar to iron-starved Trichodesmium in culture, suggestive of acclimation towards a minimal iron requirement even within an oceanic region receiving a high iron-flux. Estimates of cellular metabolic iron requirements are consistent with the availability of this trace metal playing a major role in restricting the biomass and activity of Trichodesmium throughout much of the subtropical ocean
The effect of down-regulation of Smad3 by RNAi on hepatic stellate cells and a carbon tetrachloride-induced rat model of hepatic fibrosis
Impact of del32–71-GH (Exon 3 Skipped GH) on Intracellular GH Distribution, Secretion and Cell Viability: A Quantitative Confocal Microscopy Analysis
Regeneration of Nitrogen by Zooplankton and Fish in the Northwest Africa and Peru Upwelling Ecosystems
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