One stop shop: backbones trees for important phytopathogenic genera: I (2014)

Many fungi are pathogenic on plants and cause significant damage in agriculture and forestry. They are also part of the natural ecosystem and may play a role in regulating plant numbers/density. Morphological identification and analysis of plant pathogenic fungi, while important, is often hampered by the scarcity of discriminatory taxonomic characters and the endophytic or inconspicuous nature of these fungi. Molecular (DNA sequence) data for plant pathogenic fungi have emerged as key information for diagnostic and classification studies, although hampered in part by non-standard laboratory practices and analytical methods. To facilitate current and future research, this study provides phylogenetic synopses for 25 groups of plant pathogenic fungi in the Ascomycota, Basidiomycota, Mucormycotina (Fungi), and Oomycota, using recent molecular data, up-to-date names, and the latest taxonomic insights. Lineage-specific laboratory protocols together with advice on their application, as well as general observations, are also provided. We hope to maintain updated backbone trees of these fungal lineages over time and to publish them jointly as new data emerge. Researchers of plant pathogenic fungi not covered by the present study are invited to join this future effort. Bipolaris, Botryosphaeriaceae, Botryosphaeria, Botrytis, Choanephora, Colletotrichum, Curvularia, Diaporthe, Diplodia, Dothiorella, Fusarium, Gilbertella, Lasiodiplodia, Mucor, Neofusicoccum, Pestalotiopsis, Phyllosticta, Phytophthora, Puccinia, Pyrenophora, Pythium, Rhizopus, Stagonosporopsis, Ustilago and Verticillium are dealt with in this paper

Influence of the film thickness and morphology on the colorimetric properties of spray-coated electrochromic disubstituted 3,4-propylenedioxythiophene polymers

Variation of the colorimetric properties as a function of the film thickness and morphology has been investigated for two spray-coated electrochromic disubstituted 3,4-propylenedioxythiophene polymers. Changes in the luminance, hue, and saturation have been tracked using CIE 1931 Lxy chromaticity coordinates, with CIELAB 1976 color space coordinates, L*, a*, and b*, being used to quantify the colors. For (precycled) neutral PProDOT-(Hx)2 films, with an increase in the thickness, L* is seen to decrease, with a* and b* coordinates moving in positive and negative directions, respectively, with quantification of the pink/purple (magenta) color as the summation of red and blue. For all thicknesses, L* is comparable, pre- and postcycling, with a* decreasing (less red) and b* becoming more negative (more blue) and the film now appearing as purple in the neutral state. Color coordinates for the reverse (reduction) direction exhibited hysteresis in comparison with the initial oxidation, with the specific choice of perceived color values depending not only on the film thickness but also on both the potential applied and from which direction the potential is changed. Neutral PProDOT-(2-MeBu)2 films appear blue/purple to the eye both as-deposited and after potential cycling to the transparent oxidized state. For the neutral, colored state, with an increase in the thickness, L* is seen to decrease, with a* and b* coordinates moving in positive and negative directions, respectively. For PProDOT-(2-MeBu)2 films, the a* coordinates are lower positive values and the b* coordinates are higher negative values, thus quantifying the high dominance of the blue color in the blue/purple films compared to the pink/purple PProDOT-(Hx)2 films. As for the PProDOT-(Hx)2 films, the tracks of the color coordinates show that the specific choice of perceived color values depends on the film thickness. Unlike the PProDOT-(Hx)2 films, hysteresis is absent in the oxidation/reduction track of the x−y coordinates for the PProDOT-(2-MeBu)2 films, although slight hysteresis is present in the luminance. Characterization of the film morphologies through atomic force microscopy reveals a much rougher, higher surface area morphology for the PProDOT-(2-MeBu)2 films versus the PProDOT-(Hx)2 films. The branched repeat unit in the PProDOT-(2-MeBu)2 films provides a structure that allows ions to ingress/egress more effectively, thus removing hysteresis from the optical response