Comparison of classical and in vitro multiplication of grapevine

U vinogradarskoj proizvodnji postupak cijepljenja predstavlja klasičan način dobivanja potomstva od matičnih biljaka vinove loze. To je najzastupljeniji način vegetativnog razmnožavanja, učinkovit je protiv filoksere, te daje dobre rezultate. Postupak se odvija u rasadniku, a nastali cjepovi predstavljaju klonove matičnih biljaka. In vitro razmnožavanje podrazumijeva brzo klonsko razmnožavanje biljnog materijala u sterilnim uvjetima. Prednosti in vitro razmnožavanja u odnosu na klasično razmnožavanje su kraći period dobivanja odraslih biljaka, te mogućnost ozdravljivanja biljnog materijala od virusa. Međutim, postupak in vitro razmnožavanja da bi bio uspješan zahtjeva testiranje pojedine sorte na kontrolirane uvjete. Cilj ovog rada je dati usporedbu prednosti i nedostataka klasičnog i in vitro razmnožavanja za vinovu lozu.In viticulture, the classical procedure of obtaining the adult plants is the procedure of grafting. It is the most common procedure of vegetative propagation, highly efficient against phylloxera, with significantly good results. The procedure is performed in nursery and obtained grafts present clones of mother plants. In vitro multiplication implies the fast clonal propagation of plant material in a sterile conditions. Advantages of in vitro multiplication in comparison with classical one is short period for achieving mother plants with the possibility of virus eradication of plant material. However, the procedure of in vitro multiplication is more demanding considering the fact that each variety has different response to controlled culture conditions, which need to be tested. The aim of this study is to give a comparison of advantages and disadvantages of classical and in vitro multiplication of grapevine

Coupled carbon‑iron‑phosphorus cycling in the Rainbow hydrothermal vent field

Hydrothermal venting has been shown to play a role in the global biogeochemical cycles of three bio-essential elements: iron (Fe), carbon (C) and phosphorus (P). However, our insight into the coupled cycling of Fe and associated C and P in hydrothermal plumes as well as their long-term fate in the underlying sediments remains limited. We present a detailed study, tracing the biogeochemical pathways of hydrothermally sourced Fe and the associated C and P from a buoyant to a neutrally buoyant plume and to the underlying sediments. Combining chemical and micro(spectro)scopic methods, we characterize particulate and dissolved phases recovered from the water column and sediment at two sites: one located directly in the active Rainbow hydrothermal vent field at 36°N on the mid-Atlantic ridge (MAR) and one located 3 km NE of the active vents. Our results show that the precipitates in one of the largest hydrothermal plumes on the MAR consist of aggregates of Fe nanoparticles, comprising poorly-ordered Fe oxyhydroxides and polycrystalline Fe sulfides, coated with carbon that is likely of organic origin. The sediments underlying the hydrothermal plume show enrichments in organic C, Fe, P and vent-derived trace metals such as Cu that decrease with distance from active vents. The enrichment in organic C and persistence of apparently highly-reactive Fe phases after sediment burial may reflect enhanced preservation potential of both phases as a result of the formation of organic-mineral complexes. We further demonstrate that the scavenging of dissolved seawater phosphate (PO43−) by Fe nanoparticles is constrained to early stages of particle formation and sorption reactions in the buoyant hydrothermal plume and that P burial close to the vent field is driven by the deposition of the Fe nanoparticles. In the sediment, P is then efficiently retained through sink-switching from Fe-bound to more stable, authigenic apatite phases. As such, the sediments underlying the Rainbow vent seem to faithfully record coupled emission, scavenging and burial of essential elements and therefore offer potential for reconstruction of past venting activity. The deposition and burial of partly reduced plume material (e.g., Fe sulfides) in an oxic deep-sea sediment results in sediment chemistry and diagenesis that is very specific to the hydrothermal environment, while the redox signature of the plume is gradually lost. Beyond its role as a potential source of bioavailable Fe, we highlight how hydrothermal venting represents an efficient sink for organic C and bioavailable P. The findings contribute to understanding the profound impact of geological episodes of increased hydrothermal activity on ocean biogeochemistry and the coupled ocean-climate system

Energy at Origins: Favorable Thermodynamics of Biosynthetic Reactions in the Last Universal Common Ancestor (LUCA)

Though all theories for the origin of life require a source of energy to promote primordial chemical reactions, the nature of energy that drove the emergence of metabolism at origins is still debated. We reasoned that evidence for the nature of energy at origins should be preserved in the biochemical reactions of life itself, whereby changes in free energy, ΔG, which determine whether a reaction can go forward or not, should help specify the source. By calculating values of ΔG across the conserved and universal core of 402 individual reactions that synthesize amino acids, nucleotides and cofactors from H2, CO2, NH3, H2S and phosphate in modern cells, we find that 95-97% of these reactions are exergonic (ΔG ≤ 0 kJ⋅mol-1) at pH 7-10 and 80-100°C under nonequilibrium conditions with H2 replacing biochemical reductants. While 23% of the core's reactions involve ATP hydrolysis, 77% are ATP-independent, thermodynamically driven by ΔG of reactions involving carbon bonds. We identified 174 reactions that are exergonic by -20 to -300 kJ⋅mol-1 at pH 9 and 80°C and that fall into ten reaction types: six pterin dependent alkyl or acyl transfers, ten S-adenosylmethionine dependent alkyl transfers, four acyl phosphate hydrolyses, 14 thioester hydrolyses, 30 decarboxylations, 35 ring closure reactions, 31 aromatic ring formations, and 44 carbon reductions by reduced nicotinamide, flavins, ferredoxin, or formate. The 402 reactions of the biosynthetic core trace to the last universal common ancestor (LUCA), and reveal that synthesis of LUCA's chemical constituents required no external energy inputs such as electric discharge, UV-light or phosphide minerals. The biosynthetic reactions of LUCA uncover a natural thermodynamic tendency of metabolism to unfold from energy released by reactions of H2, CO2, NH3, H2S, and phosphate

Serpentinization: Connecting geochemistry, ancient metabolism and industrial hydrogenation

Rock–water–carbon interactions germane to serpentinization in hydrothermal vents have occurred for over 4 billion years, ever since there was liquid water on Earth. Serpentinization converts iron(II) containing minerals and water to magnetite (Fe3O4) plus H2. The hydrogen can generate native metals such as awaruite (Ni3Fe), a common serpentinization product. Awaruite catalyzes the synthesis of methane from H2 and CO2 under hydrothermal conditions. Native iron and nickel catalyze the synthesis of formate, methanol, acetate, and pyruvate—intermediates of the acetyl-CoA pathway, the most ancient pathway of CO2 fixation. Carbon monoxide dehydrogenase (CODH) is central to the pathway and employs Ni0 in its catalytic mechanism. CODH has been conserved during 4 billion years of evolution as a relic of the natural CO2-reducing catalyst at the onset of biochemistry. The carbide-containing active site of nitrogenase—the only enzyme on Earth that reduces N2—is probably also a relic, a biological reconstruction of the naturally occurring inorganic catalyst that generated primordial organic nitrogen. Serpentinization generates Fe3O4 and H2, the catalyst and reductant for industrial CO2 hydrogenation and for N2 reduction via the Haber–Bosch process. In both industrial processes, an Fe3O4 catalyst is matured via H2-dependent reduction to generate Fe5C2 and Fe2N respectively. Whether serpentinization entails similar catalyst maturation is not known. We suggest that at the onset of life, essential reactions leading to reduced carbon and reduced nitrogen occurred with catalysts that were synthesized during the serpentinization process, connecting the chemistry of life and Earth to industrial chemistry in unexpected ways

The Future of Origin of Life Research: Bridging Decades-Old Divisions.

Research on the origin of life is highly heterogeneous. After a peculiar historical development, it still includes strongly opposed views which potentially hinder progress. In the 1st Interdisciplinary Origin of Life Meeting, early-career researchers gathered to explore the commonalities between theories and approaches, critical divergence points, and expectations for the future. We find that even though classical approaches and theories-e.g. bottom-up and top-down, RNA world vs. metabolism-first-have been prevalent in origin of life research, they are ceasing to be mutually exclusive and they can and should feed integrating approaches. Here we focus on pressing questions and recent developments that bridge the classical disciplines and approaches, and highlight expectations for future endeavours in origin of life research

A hydrogen-dependent geochemical analogue of primordial carbon and energy metabolism

Hydrogen gas, H2, is generated by alkaline hydrothermal vents through an ancient geochemical process called serpentinization in which water reacts with iron containing minerals deep within the Earth's crust. H2 is the electron donor for the most ancient and the only energy releasing route of biological CO2 fixation, the acetyl-CoA pathway. At the origin of metabolism, CO2 fixation by hydrothermal H2 within serpentinizing systems could have preceded and patterned biotic pathways. Here we show that three hydrothermal minerals—greigite (Fe3S4), magnetite (Fe3O4) and awaruite (Ni3Fe)—catalyse the fixation of CO2 with H2 at 100°C under alkaline aqueous conditions. The product spectrum includes formate (up to 200 mM), acetate (up to 100 µM), pyruvate (up to 10 µM), methanol (up to 100 µM), and methane. The results shed light on both the geochemical origin of microbial metabolism and on the nature of abiotic formate and methane synthesis in modern hydrothermal vents

Aroma Profile of Monovarietal Pét-Nat Ciders: The Role of Croatian Traditional Apple Varieties

The aromatic and sensory profiles of monovarietal sparkling ciders made according to the modified Méthode Ancestrale or Pétillant Naturel (Pét-Nat) method were established. Three Croatian traditional apple varieties (‘Božićnica’, ‘Bobovac’, and ‘Crvenka’) were basic raw materials for Pét-Nat ciders in this study. The basic apple must and cider parameters were determined by applying OIV methods and nitrogenous compounds, total phenols, and color parameters were analyzed by spectrophotometer. Volatile compounds in final Pét-Nat ciders were determined by SPME-Arrow-GC/MS method and Odor Active Values (OAV) were calculated. The results show that variety significantly altered the pH value, color, aromatic and sensory profile of Pét-Nat ciders. The main contributors (OAV > 1) to the aroma of all Pét-Nat ciders were 1-hexanol, 1-propanol, (6Z)-nonen-1-ol, 1-dodecanol, hexanoic, octanoic and isovaleric acid, citronellol, ethyl hexanoate, ethyl butanoate, ethyl-9-decenoate and isoamyl acetate, eugenol and methionol. ‘Božićnica’ Pét-Nat was differentiated by a high concentration of 1-decanol and 4-ethylphenol, ‘Bobovac’ by 4-vinyl guaiacol and ‘Crvenka’ by 4-ethyl guaiacol. Sensory analysis showed that the highest rated overall quality was attributed to ‘Crvenka’ Pét-Nat cider, with the high-quality color, fruity odor (‘apple’,’apple juice/compote’, ‘pineapple’, and ‘buttery’) and well-balanced taste. This research demonstrates the possibilities in the production of natural sparkling cider from traditional Croatian apple varieties by analyzing the composition and quality of the final product for the first time

The last universal common ancestor between ancient Earth chemistry and the onset of genetics.

All known life forms trace back to a last universal common ancestor (LUCA) that witnessed the onset of Darwinian evolution. One can ask questions about LUCA in various ways, the most common way being to look for traits that are common to all cells, like ribosomes or the genetic code. With the availability of genomes, we can, however, also ask what genes are ancient by virtue of their phylogeny rather than by virtue of being universal. That approach, undertaken recently, leads to a different view of LUCA than we have had in the past, one that fits well with the harsh geochemical setting of early Earth and resembles the biology of prokaryotes that today inhabit the Earth's crust