131 research outputs found
Scaling Behaviour and Complexity of the Portevin-Le Chatelier Effect
The plastic deformation of dilute alloys is often accompanied by plastic
instabilities due to dynamic strain aging and dislocation interaction. The
repeated breakaway of dislocations from and their recapture by solute atoms
leads to stress serrations and localized strain in the strain controlled
tensile tests, known as the Portevin-Le Chatelier (PLC) effect. In this present
work, we analyse the stress time series data of the observed PLC effect in the
constant strain rate tensile tests on Al-2.5%Mg alloy for a wide range of
strain rates at room temperature. The scaling behaviour of the PLC effect was
studied using two complementary scaling analysis methods: the finite variance
scaling method and the diffusion entropy analysis. From these analyses we could
establish that in the entire span of strain rates, PLC effect showed Levy walk
property. Moreover, the multiscale entropy analysis is carried out on the
stress time series data observed during the PLC effect to quantify the
complexity of the distinct spatiotemporal dynamical regimes. It is shown that
for the static type C band, the entropy is very low for all the scales compared
to the hopping type B and the propagating type A bands. The results are
interpreted considering the time and length scales relevant to the effect.Comment: 35 pages, 6 figure
Dynamics of stick-slip in peeling of an adhesive tape
We investigate the dynamics of peeling of an adhesive tape subjected to a
constant pull speed. We derive the equations of motion for the angular speed of
the roller tape, the peel angle and the pull force used in earlier
investigations using a Lagrangian. Due to the constraint between the pull
force, peel angle and the peel force, it falls into the category of
differential-algebraic equations requiring an appropriate algorithm for its
numerical solution. Using such a scheme, we show that stick-slip jumps emerge
in a purely dynamical manner. Our detailed numerical study shows that these set
of equations exhibit rich dynamics hitherto not reported. In particular, our
analysis shows that inertia has considerable influence on the nature of the
dynamics. Following studies in the Portevin-Le Chatelier effect, we suggest a
phenomenological peel force function which includes the influence of the pull
speed. This reproduces the decreasing nature of the rupture force with the pull
speed observed in experiments. This rich dynamics is made transparent by using
a set of approximations valid in different regimes of the parameter space. The
approximate solutions capture major features of the exact numerical solutions
and also produce reasonably accurate values for the various quantities of
interest.Comment: 12 pages, 9 figures. Minor modifications as suggested by refere
Case-control diagnostic accuracy study of a non-sputum CD38-based TAM-TB test from a single milliliter of blood
Background: CD4 T cell phenotyping-based blood assays have the potential to meet WHO target product profiles (TPP) of non-sputum-biomarker-based tests to diagnose tuberculosis (TB). Yet, substantial refinements are required to allow their implementation in clinical settings. This study assessed the real time performance of a simplified T cell activation marker (TAM)-TB assay to detect TB in adults from one millilitre of blood with a 24h turnaround time. Methods: We recruited 479 GeneXpert® positive cases and 108 symptomatic but GeneXpert® negativecontrols from presumptive adult TB patients in the Temeke District of Dar-es-Salaam, Tanzania. TAM-TB assay accuracy was assessed by comparison with a composite reference standard comprising GeneXpert® and solid culture. A single millilitre of fresh blood was processed to measure expression of CD38 or CD27 by CD4 T cells producing INF-γ and/or TNF-α in response to a synthetic peptide pool covering the sequences of Mycobacterium tuberculosis (Mtb) ESAT-6, CFP-10 and TB10.4 antigens on a 4-color FACSCalibur apparatus. Results: Significantly superior to CD27 in accurately diagnosing TB, the CD38-based TAM-TB assay specificity reached 93.4% for a sensitivity of 82.2% with an area under the receiver operating characteristics curve of 0.87 (95% CI 0.84-0.91). The assay performance was not significantly affected by HIV status. Conclusions: Wesuccessfully implemented TAM-TB immunoassay routine testing with a 24h turnaround time at district level in a resource limited setting. Starting from one millilitre of fresh blood and being not influenced by HIV status, TAM-TB assay format and performance appears closely compatible with the optimal TPP accuracy criteria defined by WHO for a non-sputum confirmatory TB test
Critical Dynamics of Burst Instabilities in the Portevin-Le Chatelier Effect
We investigate the Portevin-Le Chatelier effect (PLC), by compressing Al-Mg
alloys in a very large deformation range, and interpret the results from the
viewpoint of phase transitions and critical phenomena. The system undergoes two
dynamical phase transitions between intermittent (or "jerky") and "laminar"
plastic dynamic phases. Near these two dynamic critical points, the order
parameter 1/\tau of the PLC effect exhibits large fluctuations, and "critical
slowing down" (i.e., the number of bursts, or plastic instabilities, per
unit time slows down considerably).Comment: the published 4-page version is in the PRL web sit
Multifractal burst in the spatio-temporal dynamics of jerky flow
The collective behavior of dislocations in jerky flow is studied in Al-Mg
polycrystalline samples subjected to constant strain rate tests. Complementary
dynamical, statistical and multifractal analyses are carried out on the
stress-time series recorded during jerky flow to characterize the distinct
spatio-temporal dynamical regimes. It is shown that the hopping type B and the
propagating type A bands correspond to chaotic and self-organized critical
states respectively. The crossover between these types of bands is identified
by a large spread in the multifractal spectrum. These results are interpreted
on the basis of competing scales and mechanisms.Comment: 4 pages, 6 figures To be published in Phys. Rev. Lett. (2001
Relaxation oscillations and negative strain rate sensitivity in the Portevin - Le Chatelier effect
A characteristic feature of the Portevin - Le Chatelier effect or the jerky
flow is the stick-slip nature of stress-strain curves which is believed to
result from the negative strain rate dependence of the flow stress. The latter
is assumed to result from the competition of a few relevant time scales
controlling the dynamics of jerky flow. We address the issue of time scales and
its connection to the negative strain rate sensitivity of the flow stress
within the framework of a model for the jerky flow which is known to reproduce
several experimentally observed features including the negative strain rate
sensitivity of the flow stress. We attempt to understand the above issues by
analyzing the geometry of the slow manifold underlying the relaxational
oscillations in the model. We show that the nature of the relaxational
oscillations is a result of the atypical bent geometry of the slow manifold.
The analysis of the slow manifold structure helps us to understand the time
scales operating in different regions of the slow manifold. Using this
information we are able to establish connection with the strain rate
sensitivity of the flow stress. The analysis also helps us to provide a proper
dynamical interpretation for the negative branch of the strain rate
sensitivity.Comment: 7 figures, To appear in Phys. Rev.
The role of acyl-coenzyme A carboxylase complex in lipstatin biosynthesis of Streptomyces toxytricini
Streptomyces toxytricini produces lipstatin, a specific inhibitor of pancreatic lipase, which is derived from two fatty acid moieties with eight and 14 carbon atoms. The pccB gene locus in 10.6 kb fragment of S. toxytricini chromosomal DNA contains three genes for acyl-coenzyme A carboxylase (ACCase) complex accA3, pccB, and pccE that are presumed to be involved in secondary metabolism. The pccB gene encoding a β subunit of ACCase [carboxyltransferase (CT)] was identified upstream of pccE gene for a small protein of ε subunit. The accA3 encoding the α subunit of ACCase [biotin carboxylase (BC)] was also identified downstream of pccB gene. When the pccB and pccE genes were inactivated by homologous recombination, the lipstatin production was reduced as much as 80%. In contrast, the accumulation of another compound, tetradeca-5.8-dienoic acid (the major lipstatin precursor), was 4.5-fold increased in disruptant compared with wild-type. It implies that PccB of S. toxytricini is involved in the activation of octanoic acid to hexylmalonic acid for lipstatin biosynthesis
Carrion Beetles Visiting Pig Carcasses during Early Spring in Urban, Forest and Agricultural Biotopes of Western Europe
Carrion beetles are important in terrestrial ecosystems, consuming dead mammals and promoting the recycling of organic matter into ecosystems. Most forensic studies are focused on succession of Diptera while neglecting Coleoptera. So far, little information is available on carrion beetles postmortem colonization and decomposition process in temperate biogeoclimatic countries. These beetles are however part of the entomofaunal colonization of a dead body. Forensic entomologists need databases concerning the distribution, ecology and phenology of necrophagous insects, including silphids. Forensic entomology uses pig carcasses to surrogate human decomposition and to investigate entomofaunal succession. However, few studies have been conducted in Europe on large carcasses. The work reported here monitored the presence of the carrion beetles (Coleoptera: Silphidae) on decaying pig carcasses in three selected biotopes (forest, crop field, urban site) at the beginning of spring. Seven species of Silphidae were recorded: Nicrophorus humator (Gleditsch), Nicrophorus vespillo (L.), Nicrophorus vespilloides (Herbst), Necrodes littoralis L., Oiceoptoma thoracica L., Thanatophilus sinuatus (Fabricius), Thanatophilus rugosus (L.). All of these species were caught in the forest biotope, and all but O. thoracica were caught in the agricultural biotope. No silphids were caught in the urban site
Biological properties of water-soluble phosphorhydrazone dendrimers
1984-8250Dendrimers are hyperbranched and perfectly defined macromolecules, constituted of branches emanating from a central core in an iterative fashion. Phosphorhydrazone dendrimers constitute a special family of dendrimers, possessing one phosphorus atom at each branching point. The internal structure of these dendrimers is hydrophobic, but hydrophilic terminal groups can induce the solubility of the whole structure in water. Indeed, the properties of these compounds are mainly driven by the type of terminal groups their bear; this is especially true for the biological properties. For instance, positively charged terminal groups are efficient for transfection experiments, as drug carriers, as anti-prion agents, and as inhibitor of the aggregation of Alzheimer's peptides, whereas negatively charged dendrimers have anti-HIV properties and can influence the human immune system, leading to anti-inflammatory properties usable against rheumatoid arthritis. This review will give the most representative examples of the biological properties of water-soluble phosphorhydrazone dendrimers, organized depending on the type of terminal groups they bear
The Mycobacterium Tuberculosis FAS-II Dehydratases and Methyltransferases Define the Specificity of the Mycolic Acid Elongation Complexes
BACKGROUND: The human pathogen Mycobacterium tuberculosis (Mtb) has the originality of possessing a multifunctional mega-enzyme FAS-I (Fatty Acid Synthase-I), together with a multi-protein FAS-II system, to carry out the biosynthesis of common and of specific long chain fatty acids: the mycolic acids (MA). MA are the main constituents of the external mycomembrane that represents a tight permeability barrier involved in the pathogenicity of Mtb. The MA biosynthesis pathway is essential and contains targets for efficient antibiotics. We have demonstrated previously that proteins of FAS-II interact specifically to form specialized and interconnected complexes. This finding suggested that the organization of FAS-II resemble to the architecture of multifunctional mega-enzyme like the mammalian mFAS-I, which is devoted to the fatty acid biosynthesis. PRINCIPAL FINDINGS: Based on conventional and reliable studies using yeast-two hybrid, yeast-three-hybrid and in vitro Co-immunoprecipitation, we completed here the analysis of the composition and architecture of the interactome between the known components of the Mtb FAS-II complexes. We showed that the recently identified dehydratases HadAB and HadBC are part of the FAS-II elongation complexes and may represent a specific link between the core of FAS-II and the condensing enzymes of the system. By testing four additional methyltransferases involved in the biosynthesis of mycolic acids, we demonstrated that they display specific interactions with each type of complexes suggesting their coordinated action during MA elongation. SIGNIFICANCE: These results provide a global update of the architecture and organization of a FAS-II system. The FAS-II system of Mtb is organized in specialized interconnected complexes and the specificity of each elongation complex is given by preferential interactions between condensing enzymes and dehydratase heterodimers. This study will probably allow defining essential and specific interactions that correspond to promising targets for Mtb FAS-II inhibitors
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