On the relation between plausibility logic and the maximum-entropy principle: a numerical study

What is the relationship between plausibility logic and the principle of maximum entropy? When does the principle give unreasonable or wrong results? When is it appropriate to use the rule `expectation = average'? Can plausibility logic give the same answers as the principle, and better answers if those of the principle are unreasonable? To try to answer these questions, this study offers a numerical collection of plausibility distributions given by the maximum-entropy principle and by plausibility logic for a set of fifteen simple problems: throwing dice.Comment: 24 pages of main text and references, 8 pages of tables, 7 pages of additional reference

The Laplace-Jaynes approach to induction

An approach to induction is presented, based on the idea of analysing the context of a given problem into `circumstances'. This approach, fully Bayesian in form and meaning, provides a complement or in some cases an alternative to that based on de Finetti's representation theorem and on the notion of infinite exchangeability. In particular, it gives an alternative interpretation of those formulae that apparently involve `unknown probabilities' or `propensities'. Various advantages and applications of the presented approach are discussed, especially in comparison to that based on exchangeability. Generalisations are also discussed.Comment: 38 pages, 1 figure. V2: altered discussion on some points, corrected typos, added reference

Numerical Bayesian state assignment for a three-level quantum system. I. Absolute-frequency data; constant and Gaussian-like priors

This paper offers examples of concrete numerical applications of Bayesian quantum-state-assignment methods to a three-level quantum system. The statistical operator assigned on the evidence of various measurement data and kinds of prior knowledge is computed partly analytically, partly through numerical integration (in eight dimensions) on a computer. The measurement data consist in absolute frequencies of the outcomes of N identical von Neumann projective measurements performed on N identically prepared three-level systems. Various small values of N as well as the large-N limit are considered. Two kinds of prior knowledge are used: one represented by a plausibility distribution constant in respect of the convex structure of the set of statistical operators; the other represented by a Gaussian-like distribution centred on a pure statistical operator, and thus reflecting a situation in which one has useful prior knowledge about the likely preparation of the system. In a companion paper the case of measurement data consisting in average values, and an additional prior studied by Slater, are considered.Comment: 23 pages, 14 figures. V2: Added an important note concerning cylindrical algebraic decomposition and thanks to P B Slater, corrected some typos, added reference

Numerical Bayesian quantum-state assignment for a three-level quantum system. II. Average-value data with a constant, a Gaussian-like, and a Slater prior

This paper offers examples of concrete numerical applications of Bayesian quantum-state assignment methods to a three-level quantum system. The statistical operator assigned on the evidence of various measurement data and kinds of prior knowledge is computed partly analytically, partly through numerical integration (in eight dimensions) on a computer. The measurement data consist in the average of outcome values of N identical von Neumann projective measurements performed on N identically prepared three-level systems. In particular the large-N limit will be considered. Three kinds of prior knowledge are used: one represented by a plausibility distribution constant in respect of the convex structure of the set of statistical operators; another one represented by a prior studied by Slater, which has been proposed as the natural measure on the set of statistical operators; the last prior is represented by a Gaussian-like distribution centred on a pure statistical operator, and thus reflecting a situation in which one has useful prior knowledge about the likely preparation of the system. The assigned statistical operators obtained with the first two kinds of priors are compared with the one obtained by Jaynes' maximum entropy method for the same measurement situation. In the companion paper the case of measurement data consisting in absolute frequencies is considered.Comment: 10 pages, 4 figures. V2: added "Post scriptum" under Conclusions, slightly changed Acknowledgements, and corrected some spelling error

Protein accumulation in the endoplasmic reticulum as a non-equilibrium phase transition

Several neurological disorders are associated with the aggregation of aberrant proteins, often localized in intracellular organelles such as the endoplasmic reticulum. Here we study protein aggregation kinetics by mean-field reactions and three dimensional Monte carlo simulations of diffusion-limited aggregation of linear polymers in a confined space, representing the endoplasmic reticulum. By tuning the rates of protein production and degradation, we show that the system undergoes a non-equilibrium phase transition from a physiological phase with little or no polymer accumulation to a pathological phase characterized by persistent polymerization. A combination of external factors accumulating during the lifetime of a patient can thus slightly modify the phase transition control parameters, tipping the balance from a long symptomless lag phase to an accelerated pathological development. The model can be successfully used to interpret experimental data on amyloid-\b{eta} clearance from the central nervous system

Universal conductivity and dimensional crossover in multi-layer graphene

We show, by exact Renormalization Group methods, that in multi-layer graphene the dimensional crossover energy scale is decreased by the intra-layer interaction, and that for temperatures and frequencies greater than such scale the conductivity is close to the one of a stack of independent layers up to small corrections

Dimensional analysis in relativity and in differential geometry

This note provides a short guide to dimensional analysis in Lorentzian and general relativity and in differential geometry. It tries to revive Dorgelo and Schouten's notion of 'intrinsic' or 'absolute' dimension of a tensorial quantity. The intrinsic dimension is independent of the dimensions of the coordinates and expresses the physical and operational meaning of a tensor. The dimensional analysis of several important tensors and tensor operations is summarized. In particular it is shown that the components of a tensor need not have all the same dimension, and that the Riemann (once contravariant and thrice covariant), Ricci (twice covariant), and Einstein (twice covariant) curvature tensors are dimensionless. The relation between dimension and operational meaning for the metric and stress-energy-momentum tensors is discussed; and the possible conventions for the dimensions of these two tensors and of Einstein's constant $\kappa$, including the curious possibility $\kappa = 8\pi G$ without $c$ factors, are reviewed.Comment: 37 pages. V2: corrected typos and added references. V3: corrected and extended discussions of the metric and stress-energy-momentum tensors, and of Einstein's constant; added reference