Epidemiological and molecular characteristics of Infectious bursal disease virus naturally infected in the broiler flocks in the Mekong Delta of Vietnam during 2015 and 2018

Infectious bursal disease is a highly contagious and economically devastating disease in the poultry industry worldwide caused by Infectious bursal disease virus (IBDV). However, the data on epidemiological and molecular characteristics of the IBDV outbreak in broiler flocks in the Mekong Delta of Vietnam is unclear. Herein, the epidemiological data of IBDV–positive flocks over a period of 2015–2018 were recorded and the hypervariable region of the VP2 gene of IBDV was amplified to analyze the local phylogeny. The current investigation showed that the overall morbidity and mortality rates of IBDV–positive flocks were 45% and 4.81%, respectively. The IBDV–positive birds occurred clinical signs and macroscopic findings involved with the very virulent (vv) IBDV outbreak. Epidemiological results revealed that IBDV was frequently infected in broiler flocks at 12–42 days, and birds belonging to Tau Vang and Binh Dinh breeds were more sensitive to IBDV. Also, the morbidity rate of IBDV was dramatically decreased in the open farming system. Flocks with complete vaccination significantly dropped morbidity in comparison with other groups. Regarding phylogenetic analysis, all identified IBDV sequences clustered in the same branch of vv phenotype and closely homology with prior strains circulated in Vietnam and other countries. These findings first indicated the epidemiological characteristics of the IBDV–positive broiler flocks in the Mekong Delta and highlighted the IBDV strain circulating in this region

Evaluation of awake prone positioning effectiveness in moderate to severe COVID-19

Evidence mainly from high income countries suggests that lying in the prone position may be beneficial in patients with COVID-19 even if they are not receiving invasive ventilation. Studies indicate that increased duration of prone position may be associated with improved outcomes, but achieving this requires additional staff time and resources. Our study aims to support prolonged (≥ 8hours/day) awake prone positioning in patients with moderate to severe COVID-19 disease in Vietnam. We use a specialist team to support prone positioning of patients and wearable devices to assist monitoring vital signs and prone position and an electronic data registry to capture routine clinical data

Evaluation of Luminex xTAG Gastrointestinal Pathogen Panel Assay for Detection of Multiple Diarrheal Pathogens in Fecal Samples in Vietnam.

Diarrheal disease is a complex syndrome that remains a leading cause of global childhood morbidity and mortality. The diagnosis of enteric pathogens in a timely and precise manner is important for making treatment decisions and informing public health policy, but accurate diagnosis is a major challenge in industrializing countries. Multiplex molecular diagnostic techniques may represent a significant improvement over classical approaches. We evaluated the Luminex xTAG gastrointestinal pathogen panel (GPP) assay for the detection of common enteric bacterial and viral pathogens in Vietnam. Microbiological culture and real-time PCR were used as gold standards. The tests were performed on 479 stool samples collected from people admitted to the hospital for diarrheal disease throughout Vietnam. Sensitivity and specificity were calculated for the xTAG GPP for the seven principal diarrheal etiologies. The sensitivity and specificity for the xTAG GPP were >88% for Shigellaspp.,Campylobacterspp., rotavirus, norovirus genotype 1/2 (GI/GII), and adenovirus compared to those of microbiological culture and/or real-time PCR. However, the specificity was low (∼60%) for Salmonella species. Additionally, a number of important pathogens that are not identified in routine hospital procedures in this setting, such as Cryptosporidiumspp. and Clostridium difficile, were detected with the GPP. The use of the Luminex xTAG GPP for the detection of enteric pathogens in settings, like Vietnam, would dramatically improve the diagnostic accuracy and capacity of hospital laboratories, allowing for timely and appropriate therapy decisions and a wider understanding of the epidemiology of pathogens associated with severe diarrheal disease in low-resource settings

A prospective descriptive study of cryptococcal meningitis in HIV uninfected patients in Vietnam - high prevalence of Cryptococcus neoformans var grubii in the absence of underlying disease

<p>Abstract</p> <p>Background</p> <p>Most cases of cryptococcal meningitis occur in patients with HIV infection: the course and outcome of disease in the apparently immunocompetent is much more poorly understood. We describe a cohort of HIV uninfected Vietnamese patients with cryptococcal meningitis in whom underlying disease is uncommon, and relate presenting features of patients and the characteristics of the infecting species to outcome.</p> <p>Methods</p> <p>A prospective descriptive study of HIV negative patients with cryptococcal meningitis based at the Hospital for Tropical Diseases, Ho Chi Minh City. All patients had comprehensive clinical assessment at baseline, were cared for by a dedicated study team, and were followed up for 2 years. Clinical presentation was compared by infecting isolate and outcome.</p> <p>Results</p> <p>57 patients were studied. <it>Cryptococcus neoformans var grubii </it>molecular type VN1 caused 70% of infections; <it>C. gattii </it>accounted for the rest. Most patients did not have underlying disease (81%), and the rate of underlying disease did not differ by infecting species. 11 patients died while in-patients (19.3%). Independent predictors of death were age ≥ 60 years and a history of convulsions (odds ratios and 95% confidence intervals 8.7 (1 - 76), and 16.1 (1.6 - 161) respectively). Residual visual impairment was common, affecting 25 of 46 survivors (54.3%). Infecting species did not influence clinical phenotype or outcome. The minimum inhibitory concentrations of flucytosine and amphotericin B were significantly higher for <it>C. neoformans var grubii </it>compared with <it>C. gattii </it>(p < 0.001 and p = 0.01 respectively).</p> <p>Conclusion</p> <p>In HIV uninfected individuals in Vietnam, cryptococcal meningitis occurs predominantly in people with no clear predisposing factor and is most commonly due to <it>C. neoformans var grubii</it>. The rates of mortality and visual loss are high and independent of infecting species. There are detectable differences in susceptibility to commonly used antifungal drugs between species, but the clinical significance of this is not clear.</p

Use of Kriging metamodels for seismic fragility analysis of structures

International audienceIn civil engineering, a seismic fragility curve is popularly used to predict failure probability of structures under different earthquakes, and hence propose essential rehabilitation strategies through risk assessment for future earthquakes. The curve shows the failure probability as a function of seismic intensity, e.g., spectral acceleration at fundamental frequencies of structures (Sa, T1), and can be obtained using one of three approaches: engineering judgment, empirical studies or numerical simulations. The paper focuses on constructing seismic fragility curves using numerical simulations, where robust approaches of seismic reliability analysis are based on direct Monte Carlo simulation technique. The MCS based method usually requires a relatively large number of simulations to obtain a sufficiently reliable estimate of the fragility. It therefore becomes computationally expensive and time consuming as generating the simulations using the actual model or called full model of the structure. In this regard, this paper suggests using Kriging metamodel as a viable alternative of the actual model to reduce computational costs in seismic fragility computation. The Kriging metamodel is constructed based on the training samples of input and corresponding output responses of the structure. The validation of this method is performed on two numerical examples

Farmers’ livelihood strategies and perceived constraints from poor and non-poor households: A dataset from a field survey in Nghe An, Vietnam

ABSTRACT: The first Sustainable Development Goals (SDGs) of The United Nations aims to “end poverty in all its forms everywhere”. Its seven associated targets aim, among others, to eradicate extreme poverty for all people everywhere. In Vietnam, poverty eradication in ethnic minorities and mountainous areas are among the top priorities. This study aims to learn about farmers’ livelihoods associated with perceived difficulties in Chau Thai Commune, Nghe An Province, a rural mountainous area in Vietnam. A random sampling technique and a face-to-face interview method were employed to conduct a field survey in the region in 2018. The dataset collected from 215 households shows that Chau Thai Commune's livelihood largely depends on agriculture and forestry. Plantation forest and livestock are major sources of farmers’ income while forestland accounts for over 90% of households’ land. Besides, the disparity in livelihood in areas such as forestland, labor and income between the poor and non-poor households is reported. This primary data could be useful for scholars who want to conduct a further in-depth study and or experts, policymakers who work in Vietnam's ‘New Rural Development’ program to devise a better rural livelihood -improvement policy for farmers, particularly the poor in the uplands of Vietnam and beyond

Factors affecting synthesis of silver-nanoparticles and antimicrobial applications

Silver nanoparticles were synthesized from silver sulfate by using the chemical reduction method with dextran as both a reducing agent and a protective agent. The influence of reaction temperature, time, and initial pH on the synthesis was investigated. The formation of Ag nano-particles (AgNPs) and their morphology were characterized with UV-Vis spectroscopy, X-ray diffraction, scanning electron microscopy, energy dispersive X-ray analysis, and Fourier transform-infrared spectroscopy. The antifungal and antibacterial effects of AgNPs/dextran on Xanthomonas oryzae and Pyricularia oryzae were tested