Comparative modeling of DszC, an enzyme in biodesulfurization, and performing in silico point mutation for increasing tendency to oil

Desulfurization protein named DszC from Rhodococcus erythropolis is the key enzyme for biodesulforization of dibenzothiophene (DBT) in 4S pathway, which is a pathway with four enzymes. DszC enzyme biodesulfurizes DBT and its derivatives in oil components and biphasic systems. It functions well at the oil- water interface. In this study point mutation performed in DszC enzyme regarding to increase protein hydrophobicity and stability for application in immobilized form. 3D model of DszC predicted using Phyre2, SAM-T08 and M4t servers. I-Mutant 2 server used to determine potential spots for point mutation, and Molegro Virtual Docker (MVD) used for performing point mutation on 3D model. Hydrophobicity plots generated by Bioedit version 7.0.8.0 in Kyte-Doolittle scale indicated that protein hydrophobicity is increased after mutation. Also protein stability increased 26.11 units in scale of DDC2

Cyanobacterial metabolites as a source of sunscreens and moisturizers: a comparison with current synthetic compounds

The recognition of the harmful effects of ultraviolet radiation on the skin has led to the commercial development of inorganic and synthetic organic UV filters that can attenuate the negative effects of sunlight exposure. In addition, chemical moisturizers are extensively used in cosmetic products to improve the ability of skin to retain water. Whilst these chemicals have clear beneficial qualities, they may also have adverse effects such as contact sensitivity, oestrogenicity and even tumorigenic effects on human skin. Furthermore, the accumulation of such chemicals in the aquatic environment could be potentially harmful. Consequently, there is interest in exploiting safer alternatives derived from biological sources, especially from photosynthetic organisms such as cyanobacteria that have developed mechanisms for coping with high UV irradiation and desiccation. In order to overcome the detrimental effects of UV radiation, these microorganisms produce UV screening compounds such as mycosporine-like amino acids and scytonemin, which are good candidates as alternatives to current synthetic UV filters. In addition, extracellular substances produced by some extremophilic species living in hyper-arid habitats have a high water retention capacity and could be used in cosmetic products as moisturizers. In this review, we present an overview of the literature describing the potential of cyanobacterial metabolites as an alternative source for sunscreens and moisturizers

Induction of nano pore in Agrobacterial hemoglobin

Introduction: A variety of oxygen-transport and -binding proteins exist in organisms including bacteria, protozoans, and fungi all have hemoglobin-like proteins. In addition to dealing with transport and sensing of oxygen, they may also deal with NO2, CO2, sulfide compounds, and even O2 scavenging in environments. Also they detoxified chlorinated materials like P450 enzymes and peroxidases and use as a detector of nitrate and hydrogen peroxide. Pore-forming bacterial globins are interested for filtration. Materials and methods: Although there are data for bacterial toxin as a filter, here we used Agrobacterial hem to induce nano pore in the heme structure using point mutation. Results: Investigations showed that three amino acids leucine 76, alanine 83 and histidine 80 are important for pore formation in Agrobacterium hemoglobin. A point mutation on leucine 76 to glycine, histidine 80 to asparagine and alanine 83 to lysine step by step led to create the nano pore 0.7- 0.8 nm in the globin. Discussion and conclusion: These mutations in bacterial hemoglobin increase the stability when mutation is with it’s at pH7. This mutation decreases the aliphatic index however increase the stability index