43 research outputs found

    Development of a High-Throughput Candida albicans Biofilm Chip

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    We have developed a high-density microarray platform consisting of nano-biofilms of Candida albicans. A robotic microarrayer was used to print yeast cells of C. albicans encapsulated in a collagen matrix at a volume as low as 50 nL onto surface-modified microscope slides. Upon incubation, the cells grow into fully formed “nano-biofilms”. The morphological and architectural complexity of these biofilms were evaluated by scanning electron and confocal scanning laser microscopy. The extent of biofilm formation was determined using a microarray scanner from changes in fluorescence intensities due to FUN 1 metabolic processing. This staining technique was also adapted for antifungal susceptibility testing, which demonstrated that, similar to regular biofilms, cells within the on-chip biofilms displayed elevated levels of resistance against antifungal agents (fluconazole and amphotericin B). Thus, results from structural analyses and antifungal susceptibility testing indicated that despite miniaturization, these biofilms display the typical phenotypic properties associated with the biofilm mode of growth. In its final format, the C. albicans biofilm chip (CaBChip) is composed of 768 equivalent and spatially distinct nano-biofilms on a single slide; multiple chips can be printed and processed simultaneously. Compared to current methods for the formation of microbial biofilms, namely the 96-well microtiter plate model, this fungal biofilm chip has advantages in terms of miniaturization and automation, which combine to cut reagent use and analysis time, minimize labor intensive steps, and dramatically reduce assay costs. Such a chip should accelerate the antifungal drug discovery process by enabling rapid, convenient and inexpensive screening of hundreds-to-thousands of compounds simultaneously

    Is there a role for melatonin in fibromyalgia?

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    Fibromyalgia, characterised by persistent pain, fatigue, sleep disturbance and cognitive dysfunction, is a central sensitivity syndrome that also involves abnormality in peripheral generators and in the hypothalamic pituitary adrenal axis. Heterogeneity of clinical expression of fibromyalgia with a multifactorial aetiology has made the development of effective therapeutic strategies challenging. Physiological properties of the neurohormone melatonin appear related to the symptom profile exhibited by patients with fibromyalgia and thus disturbance of it’s production would be compatible with the pathophysiology. Altered levels of melatonin have been observed in patients with fibromyalgia which are associated with lower secretion during dark hours and higher secretion during daytime. However, inconsistencies of available clinical evidence limit conclusion of a relationship between levels of melatonin and symptom profiles in patients with fibromyalgia. Administration of melatonin to patients with fibromyalgia has demonstrated suppression of many symptoms and an improved quality of life consistent with benefit as a therapy for the management of this condition. Further studies with larger samples, however, are required to explore the potential role of melatonin in the pathophysiology of fibromyalgia and determine the optimal dosing regimen of melatonin for the management of fibromyalgia

    The theoretical prediction of the boundary-layer-blockage and external flow choking at moving aircraft in ground effects

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    The theoretical discoveries of the Sanal flow choking [V. R. Sanal Kumar et al., "Sanal flow choking: A paradigm shift in computational fluid dynamics code verification and diagnosing detonation and hemorrhage in real-world fluid-flow systems,"Global Challenges 4, 2000012 (2020)] and streamtube flow choking [V. R. Sanal Kumar et al., "Deflagration to detonation transition in chemical rockets with sudden expansion/divergence regions,"AIAA Paper No. 2020-3520, 2020] achieved significant contemplation in all branches of science and engineering for resolving various unanswered scientific questions brought onward from the beginning of this era [V. R. Sanal Kumar et al., "A closed-form analytical model for predicting 3D boundary layer displacement thickness for the validation of viscous flow solvers,"AIP Adv. 8, 025315 (2018)]. The applications of these flow choking phenomena are more significant in aerospace industries [V. R. Sanal Kumar et al., "Nanoscale flow choking and spaceflight effects on cardiovascular risk of astronauts - A new perspective,"AIAA Paper No. 2021-0357, 2021] and medical sciences [V. R. Sanal Kumar et al., "Lopsided blood-thinning drug increases the risk of internal flow choking leading to shock wave generation causing asymptomatic cardiovascular disease,"Global Challenges 2021, 2000076]. Herein, as an offshoot of the Sanal flow choking phenomena, the proof of the concept of boundary-layer-blockage (BLB) persuaded external-flow-choking (EFC) at aircraft-in-ground (AIG)-effect is presented. When the aircraft's ground clearance is relatively low, the evolving BLB factor from both planes (the bottom surface of the aircraft and the ground) creates a transient fluid-throat, leading to the Sanal flow choking and supersonic flow development in the duct flow region. In this physical situation, the pressure ratio (Ptotal/Pstatic) at the external flow choking region is exclusively a function of the specific heat ratio of the fluid. The EFC is more prone for the low wing aircraft flying in the near vicinity to the ground and/or sea with relatively high subsonic Mach number and low angle of attack. At this flying condition, the underside of the aircraft (fuselage and/or wing) and the ground creates the convergent-divergent duct flow effect leading to the EFC at the critical total-to-static pressure ratio. The accurate estimation of the BLB factor at the location of the EFC at AIG effect is presented in this manuscript as a universal yardstick for two-dimensional (2D) in silico simulation. For establishing the proof of the concept of external flow choking and supersonic flow development and shock wave generation, the 2D in silico results are presented for both stationary and moving airfoils in ground effect. In silico results show that the airfoil at stationary position exhibits relatively higher BLB factor and an immediate occurrence of the EFC than the same airfoil moving with the identical inflow Mach number and Reynolds number. We could establish herein that the moving vehicle simulation is inevitable for capturing actual flow physics and further precise examination of the BLB factor and the possibilities of the occurrence of the EFC for credible trajectory optimization of high-speed ground-effect vehicles. © 2021 Author(s).12 month embargo; published online: 11 March 2021This item from the UA Faculty Publications collection is made available by the University of Arizona with support from the University of Arizona Libraries. If you have questions, please contact us at [email protected]

    Chem-Bioinformatics and QSAR: A Review of QSAR Lacking Positive Hydrophobic Terms

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