24 research outputs found
Cytb LF Haplotypes
Alignment of Cytb long fragment haplotype
Samples_table
New sequence data and sequence data retrieved from GenBank for all taxa analysed. Details on sampling locality are given for each specimen analysed. Haplotype names as well as GenBank accession numbers are detailed for each loci per specimen, as well as source of previous published data. Information on were the samples are held in is also displayed
Cytb SF Haplotypes
Aligment of cytb short fragment haplotype
IRBP LF Haplotypes
Alignment of IRBP long fragment haplotypes
MC_GBS_L50_MD30
3341 loci analysed for this study. Individuals have less than 30% missing data
SNPs_publication_ATCG
file 1: 'SNPs_publication_ATCG': this file contains the raw SNPs database in GenAlEx format for two sets of samples (sheets 1 and 2): sheet 1: SNPs data for all 274 cat samples used in the analyses (139 domestic cats - FCA; 130 putative European wildcats - FSI; 5 known hybrids FCA x FSI), characterised by 158 loci; sheet 2: SNPs data for 226 cat samples (139 domestic cats - FCA; 82 European wildcats - FSI; 5 known hybrids FCA x FSI), characterised by 158 loci. This sample set was created to exclude possible hybrids from the representatives of European wildcats. These files can be converted to other formats using GenAlEx
Study areas and species occurrence data.
<p>(a) The three nested study areas and occurrence data of target species (<i>Iris boissieri</i> and <i>Taxus baccata</i>) in (b) the Iberian Peninsula at 5km<sup>2</sup> cell size, (c) the Iberian Northwest at 5km<sup>2</sup> (empty squares) and 1km<sup>2</sup> (filled squares), and (d) the Peneda-Gerês National Park at 1km<sup>2</sup> cell size.</p
Final sets of predictors used to calibrate models.
<p>The description and attributes of the original datasets are also provided.</p
Spatial projections of habitat suitability for <i>Iris boissieri</i> derived from Species Distribution Models (SDMs) based on traditional predictors (climate and land-cover) and on satellite-derived ecosystem functional attributes (EFAs).
<p>Overlay maps of current potential presence-absence distributions predicted using an ensemble modelling approach per combination of spatial extent (IP, NW and NP) and resolution (1km and 5km) for <i>Iris boissieri</i>. IP: Iberian Peninsula; NW: Northwest IP; NP: Peneda-Gerês National Park.</p