65 research outputs found
Local ecological knowledge and multidisciplinary approach lead to discovery of hidden biodiversity in the deep ocean of Labrador, Canada
nternational commitments to preserve global biodiversity target the protection of 30% of marine habitats by 2030. The
lack of even basic knowledge of many marine areas (e.g., deep oceans) combined with short timelines require integrative knowledge
and multidisciplinary techniques to be used to efficiently identify areas worthy of protection. Here we outline a case study of the
discovery of the Makkovik Hanging Gardens found in a deep-water trough in coastal Labrador, Canada. The area is of ecological
significance because it supports high densities of vulnerable marine ecosystem indicator taxa, including the gorgonian coral Primnoa
resedaeformis on portions of its vertical submarine walls. This study illustrates the exploratory process initiated by Nunatsiavut, which
integrated local knowledge, scientific models, and a variety of technologies (such as remotely operated vehicles and multibeam sonar)
to discover deep-water hidden biodiversity toward the advancement of both local Indigenous and global conservation goals
What makes you not a Sikh? : a preliminary mapping of values
This study sets out to establish which Sikh values contrasted with or were shared by non-Sikh adolescents. A survey of attitude toward a variety of Sikh values was fielded in a sample of 364 non-Sikh schoolchildren aged between 13 and 15 in London. Values where attitudes were least positive concerned Sikh duties/code of conduct, festivals, rituals, prayer Gurdwara attendance, listening to scripture recitation, the amrit initiation. Sikh values empathized with by non-Sikhs concerned family pride, charity, easy access to ordination and Gurdwaras, maintaining the five Ks, seeing God in all things, abstaining from meat and alcohol and belief in the stories of Guru Nanak. Further significant differences of attitude toward Sikhism were found in comparisons by sex, age and religious affiliation. Findings are applied to teaching Sikhism to pupils of no faith adherence. The study recommends the extension of values mapping to specifically Sikh populations
Intravital FRAP imaging using an E-cadherin-GFP mouse reveals disease- and drug-dependent dynamic regulation of cell-cell junctions in live tissue
E-cadherin-mediated cell-cell junctions play a prominent role in maintaining the epithelial architecture. The disruption or deregulation of these adhesions in cancer can lead to the collapse of tumor epithelia that precedes invasion and subsequent metastasis. Here we generated an E-cadherin-GFP mouse that enables intravital photobleaching and
quantification of E-cadherin mobility in live tissue without affecting normal biology. We demonstrate the broad applications of this mouse by examining
E-cadherin regulation in multiple tissues, including mammary, brain, liver, and kidney tissue, while specifically monitoring E-cadherin mobility during
disease progression in the pancreas. We assess E-cadherin stability in native pancreatic tissue upon genetic manipulation involving Kras and p53
or in response to anti-invasive drug treatment and gain insights into the dynamic remodeling of E-cadherin during in situ cancer progression. FRAP in the E-cadherin-GFP mouse, therefore, promises to be a valuable tool to fundamentally expand our understanding of E-cadherin-mediated events in native microenvironments
Antibacterial Potential of Trihydroxycyclohexa-2,4-Diene-1- Carboxylic Acid: Insight from DFT, Molecular Docking, and Molecular Dynamic Simulation
In this study, (z)-5-((3-(2,3-dihydroxyphenyl) acryloyl) oxy)- 1,3,4-trihydroxycyclohexa-
2,4-diene-1-carboxylic acid (chlorogenic acid) was isolated and characterized using UVVisible,
1H NMR and 13C NMR, FT-IR, along with detailed investigation using density
functional theory (DFT), in-silico molecular docking, and molecular dynamics (MD)
simulation. Results from DFT calculation indicates that the titled compound is very
stable with energy gap of 3.7–7.8 for variable functionals, and similarly, the structural
parameters show very close agreement with X-ray data for bond lengths and angles.
The FT-IR spectrum results revealed stretching vibration O–H (3366 cm−1), C=O
(1689 cm−1), C–H (1636, 1606, 1522, and 1442 cm−1), C–O (1192 and 1122 cm−1). The
drug-likeness analyses and ADME studies showed drug-likeness ability and good oral
behavior of the investigated compound as it obeys Lipinski, Ghose, Veber and Egan
rules. Hepatotoxic and immunotoxic activities were indicated for the toxicity/toxicological
endpoints of the studied compound. The molecular docking indicates a binding affinity
of −8.30 and 9.5 kcal/mol for the titled compound, which is higher than the standard
drug. From the molecular dynamic simulation results, chlorogenic-2H14 (complex B)
revealed variations in RMSD values of less than 3Å, indicating that the protein structure
underwent minor conformational changes throughout the simulation. Chlorogenicprotein
complexes had average RGyr values of 3.704 − 4.907Å, which indicates
compaction during the simulation. Therefore, it can be said that the titled compound has
potential to be effective as an agent for cholera management, and the results obtained
can be platform further in-vitro, vivo and clinical trials
MHC Class I Endosomal and Lysosomal Trafficking Coincides with Exogenous Antigen Loading in Dendritic Cells
BACKGROUND: Cross-presentation by dendritic cells (DCs) is a crucial prerequisite for effective priming of cytotoxic T-cell responses against bacterial, viral and tumor antigens; however, this antigen presentation pathway remains poorly defined. METHODOLOGY/PRINCIPAL FINDINGS: In order to develop a comprehensive understanding of this process, we tested the hypothesis that the internalization of MHC class I molecules (MHC-I) from the cell surface is directly involved in cross-presentation pathway and the loading of antigenic peptides. Here we provide the first examination of the internalization of MHC-I in DCs and we demonstrate that the cytoplasmic domain of MHC-I appears to act as an addressin domain to route MHC-I to both endosomal and lysosomal compartments of DCs, where it is demonstrated that loading of peptides derived from exogenously-derived proteins occurs. Furthermore, by chasing MHC-I from the cell surface of normal and transgenic DCs expressing mutant forms of MHC-I, we observe that a tyrosine-based endocytic trafficking motif is required for the constitutive internalization of MHC-I molecules from the cell surface into early endosomes and subsequently deep into lysosomal peptide-loading compartments. Finally, our data support the concept that multiple pathways of peptide loading of cross-presented antigens may exist depending on the chemical nature and size of the antigen requiring processing. CONCLUSIONS/SIGNIFICANCE: We conclude that DCs have 'hijacked' and adapted a common vacuolar/endocytic intracellular trafficking pathway to facilitate MHC I access to the endosomal and lysosomal compartments where antigen processing and loading and antigen cross-presentation takes place
A RhoA-FRET Biosensor Mouse for Intravital Imaging in Normal Tissue Homeostasis and Disease Contexts.
The small GTPase RhoA is involved in a variety of fundamental processes in normal tissue. Spatiotemporal control of RhoA is thought to govern mechanosensing, growth, and motility of cells, while its deregulation is associated with disease development. Here, we describe the generation of a RhoA-fluorescence resonance energy transfer (FRET) biosensor mouse and its utility for monitoring real-time activity of RhoA in a variety of native tissues in vivo. We assess changes in RhoA activity during mechanosensing of osteocytes within the bone and during neutrophil migration. We also demonstrate spatiotemporal order of RhoA activity within crypt cells of the small intestine and during different stages of mammary gestation. Subsequently, we reveal co-option of RhoA activity in both invasive breast and pancreatic cancers, and we assess drug targeting in these disease settings, illustrating the potential for utilizing this mouse to study RhoA activity in vivo in real time
- …