79 research outputs found
Generation of gravity waves in an experimental facility
The development of a computational tool to study the propagation of gravity waves in
water is carried out by reproducing the conditions of an experimental study. The problem
consists in the propagation of a gravity wave in a channel with a bottom topography
where the is already a mean flow in the opposite direction. The physics of such problem
is analogous to the one involved in the Hawking radiation of a black hole, which stresses
the practical importance of the computational tool being developed, given that black holes
are phenomena difficult for us to study.
The problem will be analyzed with both a theoretical and a numerical approach. The
numerical simulations will be performed by means of the software Gerris.
As a first approach, a simpler version of the problem in which the channel is straight
is analyzed. From the theoretical point of view, in these conditions and under some assumptions
about the nature of the flow, the equations describing the motion of the fluid
(Navier-Stokes equations) can be simplified up to a linear theory which provides an analytical
solution. The analytical linear results are then contrasted with those obtained with
a numerical simulation in order to check the validity of the latter. Once this step is accomplished,
the actual problem of a flow in channel with a bottom topography will be studied
by means of a numerical simulation, using the same computational methodology. The
results obtained will be compared to those obtained in the experimental study mentioned
earlier. The aim of this project is to implement a numerical tool that allows us to investigate
up to which point the experimental analogy between gravity waves propagating
against a flume in a channel of variable depth and the Hawking radiation of a black hole
is applicable. The computational tool we will derive can be later extended to the study of
the propagation of water gravity waves in flows under different conditions.IngenierĂa Aeroespacia
Proteomic approach in the search of new cardiovascular biomarkers
Proteomic approach in the search of new cardiovascular biomarkers With the increasing incidence of cardiovascular diseases worldwide, specifically atherosclerosis and heart failure, the search for novel biomarkers remains a priority. As opposed to complex diagnostic techniques that may not be suitable to be applied to the wider population, biomarkers are useful for population screening. The search for novel biomarkers is based on knowledge of the molecular and cellular processes that take place in the development of a specific disease. Atherosclerosis and heart failure are characterized by a long period of silent disease progression, allowing early diagnosis and the potential of early therapeutic intervention. The use of the so-called proteomic techniques allows not only protein identification but partial characterization, which includes expression and also post-translational modification of these proteins. This allows for the discovery of previously unknown proteins involved in cardiovascular diseases, including some that may be suitable to be used as biomarkers. However, to approach this issue, we have to overcome difficulties such as tissue heterogeneity (vessel wall or myocardium) and the lack of fresh human samples. We discuss the proteomic study of human plaques, secreted proteins by pathologic and normal vessel wall, and left ventricular hypertrophy as potential sources of new biologic markers of cardiovascular disease
Easy-To-Synthesize Spirocyclic Compounds Possess Remarkable in Vivo Activity against Mycobacterium tuberculosis
Society urgently needs new, effective medicines for the treatment of tuberculosis. To kick-start the required hit-to-lead campaigns, the libraries of pharmaceutical companies have recently been evaluated for starting points. The GlaxoSmithKline (GSK) library yielded many high-quality hits, and the associated data were placed in the public domain to stimulate engagement by the wider community. One such series, the spiro compounds, are described here. The compounds were explored by a combination of traditional in-house research and open source methods. The series benefits from a particularly simple structure and a short associated synthetic chemistry route. Many members of the series displayed striking potency and low toxicity, and highly promising in vivo activity in a mouse model was confirmed with one of the analogues. Ultimately the series was discontinued due to concerns over safety, but the associated data remain public domain, empowering others to resume the series if the perceived deficiencies can be overcome
Diversification and Development of Spiros Compounds for the Treatment of Tuberculosis
This thesis reports the synthesis and biological evaluation of novel molecules intended for the treatment of tuberculosis. Tuberculosis is a dangerous infectious disease caused by the bacterium Mycobacterium tuberculosis, which if not treated or treated inefficiently can be fatal. It was estimated that in 2012 tuberculosis was responsible for the death of 1.3 million people and the infection of 8.6 million more. The current treatment for tuberculosis consists of a combination of drugs, which typically involve excessively long term treatments, resulting in many cases in the partial completion of the treatment. In recent years multiâ and extensively drug resistant strains have evolved. New drugs with new mechanisms of action are urgently needed. The antiâtubercular drug pipeline is weak, with few new chemical entities currently in clinical trials. In an attempt to fulfil this need, GlaxoSmithKline recently reported several new chemical series with potential for the treatment of TB. One, based on a thiophene spirocycle core, and named the Spiros family, was found to inhibit the growth of Mycobacterium tuberculosis through a different mechanism of action from any other approved antiâtubercular drug. A synthesis of this Spiros family has recently been developed via a three-steps oxaâPictetâSpengler reaction, and several members of this family have exhibited potency vs. virulent strains of TB. This thesis reports the synthesis of several novel compounds with variation in the heterocyclic ring of the Spiros family, a portion of the molecule that has not been explored to date. The oxaâPictetâSpengler reaction was used as the key transformation of this reaction, tolerating a range of aromatic heterocycles. Initial biological activity data for the compounds synthesised were obtained, indicating promising levels of potency comparable with already-reported analogs in this series vs. the virulent strain of TB. It was found that potent anti-TB molecules are available in one chemical step from commercial materials
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