RESULTS OF RECONNAISSANCE STUDIES ON DETECTION OF BABESIOSIS FOCI IN THE IRKUTSK REGION

This article contains results of reconnaissance studies intended to find foci of babesia in the Irkutsk region. Babesia DNA were founded in two types of ticks (I. persulcatus, H. concinna) in the three districts of the Irkutsk region (Ekhirit-Bulagatsky, Irkutsky, Shelekhovsky). The analysis of 1220 nr length nucleotide sequences of 18S rRNA gene of five Babesia samples was conducted. It was shown that the identified Babesia sequenced differ from previously known, and refer to the two genetic groups. The first group included babesia, genetically most similar to the sheep pathogen Babesia crassa, second contains sample, nucleotide sequence of which is significantly different from all known (less than 95 % homology)

IDENTIFICATION OF THEILERIA EQUI IN HORSE BLOOD IN THE IRKUTSK REGION

This paper describes the detection of Piroplasmida DNA in the blood of horses. 166 blood samples of horses from five districts of the Irkutsk region were studied. The high piroplasms infection rate in horses (69 %) was found. For six positive samples nucleotide sequences were determined. The comparison of determined 18S rRNA gene sequences with previously published sequences showed that all revealed piroplasms DNA samples are Theileria equi. The data are presented on the lethal cases of equine piroplasmosis in the Irkutsk region in 2008

Detection of Babesia and Anaplasmataceae bacteria in small mammals from Irkutsk and Novosibirsk regions

Tissue samples from 228 small mammals captured from 2013 to 2015 in four districts of Irkutsk region and in one district of Novosibirsk region were examined for the presence of Anaplasmataceae bacteria and Babesia parasites by nested PCR method with subsequent sequencing of positive samples. In Ekhirit-Bulagatskiy District of Irkutsk region, Babesia microti DNA was found in 10.9 % of small mammals, Anaplasma phagocytophilum DNA - in 7.3 %, and Ehrlichia muris DNA - in 1.8 %. Infected mammals were not found in the other three examined districts of Irkutsk region. In Novosibirsk region, B. microti DNA was found in 8.9 % of small rodents, A. phagocytophilum DNA - in 8.9 % of small mammals, and Candidatus Neoehrlichia mikurensis DNA - in 8.9 % of small mammals. The identified infection agents corresponded to microorganism species and genetic variants previously found in Ixodes persulcatus ticks but not in ticks of other species

GENETIC AND ECOLOGICAL CHARACTERISTICS AN ORIGINAL VARIANT BORNE ENCEPHALITIS VIRUS (THE «GROUP 886»), CIRCULATING IN THE BAIKAL REGION

New data was obtained about the original version of tickborne encephalitis virus (TBE), circulating in the territory of Eastern Siberia. With the help of molecular hybridization of nucleic acids (MGNA) and genome sequencing we revealed a group of 13 strains having a genetic structure analogous to strain 886-84, which was described earlier as the sole representative of the probable genotype 5. The formation of a separate cluster on the phylogenetic tree, differentiation level of genetic differences from other genotypes more than 12 %, own habitat, ecological relationship with all the links of a vector-borne chain, participation in human pathology, the stability and duration of circulation in nature confirms the validity of certification of «group 886» as a separate TBEV genotype 5