13 research outputs found

    Diffusion MRI in peripheral nerves: Optimized <em>b</em> values and the role of non-Gaussian diffusion.

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    Background Diffusion-weighted imaging (DWI) provides specific in vivo information about tissue microstructure, which is increasingly recognized for various applications outside the central nervous system. However, standard sequence parameters are commonly adopted from optimized central nervous system protocols, thus potentially neglecting differences in tissue-specific diffusional behavior. Purpose To characterize the optimal tissue-specific diffusion imaging weighting scheme over the b domain in peripheral nerves under physiologic and pathologic conditions. Materials and Methods In this prospective cross-sectional study, 3-T MR neurography of the sciatic nerve was performed in healthy volunteers (n = 16) and participants with type 2 diabetes (n = 12). For DWI, 16 b values in the range of 0-1500 sec/mm2 were acquired in axial and radial diffusion directions of the nerve. With a region of interest-based approach, diffusion-weighted signal behavior as a function of b was estimated using standard monoexponential, biexponential, and kurtosis fitting. Goodness of fit was assessed to determine the optimal b value for two-point DWI/diffusion tensor imaging (DTI). Results Non-Gaussian diffusional behavior was observed beyond b values of 600 sec/mm2 in the axial and 800 sec/mm2 in the radial diffusion direction in both participants with diabetes and healthy volunteers. Accordingly, the biexponential and kurtosis models achieved a better curve fit compared with the standard monoexponential model (Akaike information criterion &gt;99.9% in all models), but the kurtosis model was preferred in the majority of cases. Significant differences between healthy volunteers and participants with diabetes were found in the kurtosis-derived parameters Dk and K. The results suggest an upper bound b value of approximately 700 sec/mm2 for optimal standard DWI/DTI in peripheral nerve applications. Conclusion In MR neurography, an ideal standard diffusion-weighted imaging/diffusion tensor imaging protocol with b = 700 sec/mm2 is suggested. This is substantially lower than in the central nervous system due to early-occurring non-Gaussian diffusion behavior and emphasizes the need for tissue-specific b value optimization. Including higher b values, kurtosis-derived parameters may represent promising novel imaging markers of peripheral nerve disease. ©RSNA, 2021 Online supplemental material is available for this article. See also the editorial by Jang and Du in this issue

    A workflow for bacterial metabolic fingerprinting and lipid profiling: application to Ciprofloxacin challenged Escherichia coli

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    The field of lipidomics focuses upon the non-targeted analysis of lipid composition, the process of which follows similar routines to those applied in conventional metabolic profiling, however lipidomics differs with respect to the sample preparation steps and chosen analytical platform applied to the sample analysis. Conventionally, lipidomics has applied analytical techniques such as direct infusion mass spectrometry and more recently reverse phase liquid chromatography–mass spectrometry, for the detection of mono-, di-, and tri-acyl glycerols, phospholipids, and other complex lipophilic species such as sterols. The field is rapidly expanding, especially with respect to the clinical sciences where it is known that changes of lipid composition, especially phospholipids, are commonly associated with many disease processes. As a proof of principle study, a small number of Escherichia coli isolates were selected on the basis of their sensitivity to a second generation fluoroquinolone antibiotic, known as Ciprofloxacin (E. coli isolates 161 and 171, non-ST131 isolates, which are resistant and sensitive respectively: E. coli isolates 160 and 173, ST131 sequence isolates which are resistant and susceptible respectively). It has been proposed that Ciprofloxacin may be a surface active drug that interacts at the surface-water interface of the phospholipid bi-layer where the head groups reside. Further, antibiotic resistance through intracellular exclusion is known to result in remodelling of the phospholipid membrane. Therefore, to study the effects of Ciprofloxacin on both susceptible and resistant bacterial strains, lipid profiling would present an informative approach. Control and antibiotic challenged cultures for each of the isolates were compared for changes in metabolite and lipid composition as detected by FT-IR spectroscopy and RP-UHPLC–MS, and appraised with a variety of chemometric data analysis approaches. The developed bacterial lipidomics workflow was deemed to be highly reproducible (with respect to the employed technical and analytical routines) and led to the detection of a large array of lipid classes as well as highlighting a range of significant lipid alterations that differed in regulation between susceptible and resistant E. coli isolates

    Restructuring of firms in transition: ownership, institutions and openness to trade

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    We develop a theoretical framework for defensive and strategic restructuring, and provide estimates of restructuring in privatized firms in an advanced transition economy: Slovenia. Our rich data point to both types of restructuring, as well credit rationing and bargaining with respect to investment. Privatized firms display profit-maximizing behavior, and a firm's export orientation and institutional features, such as insider vs outsider privatization, employee ownership, and employee control, do not affect the firm's employment and investment behavior. The results suggest that a major exposure to world competition induces similar economic behavior in firms with different structural and institutional characteristics. Journal of International Business Studies (2008) 39, 725–746. doi:10.1057/palgrave.jibs.8400379

    Fourier transform infrared spectroscopy: unlocking fundamentals and prospects for bacterial strain typing

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