Cambridge Monographs in Experimental Biology

and the magnitude of FCT. Because active torque is proportional to n 2 and passive torque to n, the ratio of active to passive torque increases as n increases (Eq. 5), even while both quantities increase individuallẏ The increase in the ratio indicates an enhanced capability for active maneuvers and active stabilization, whereas the increase in FCT adds to passive stability. Thus, increasing wingbeat frequency enhances both maneuverability and stability. Hummingbirds provide an interesting example; males typically have greater wingbeat frequencies (21) and smaller body sizes as compared to females of the same species, potentially conferring a benefit in maneuverability and therefore an advantage in display flights (22) as well as greater stability when experiencing an external perturbation. These benefits are not without cost, because increasing wingbeat frequency increases the inertial and profile power requirements of flapping flight. Finally, the success of our FCT model in predicting yaw deceleration dynamics implies that passive damping may be important to flight control in flying animals across a wide range of body sizes. For example, if a steadily flapping animal experiences a brief perturbation in midstroke, by the time it is prepared to execute a corrective wingbeat, FCT will have eroded much of the effect of the perturbation, regardless of the wingbeat frequency employed by the animal. Thus, FCT provides open loop stability for some aspects of animal flight, reducing its neuromuscular and neurosensory requirements. These are not eliminated, because FCT results in asymmetric forces from symmetric flapping, implying that the animal's muscles must generate asymmetric forces and suggesting neural regulation to enforce symmetry. Furthermore, FCT does not address all the stability problems faced by flying animals. This study is limited to yaw dynamics in hovering or slow-speed flight; FCT is likely to be influential in fast forward flight, but no data are available to test such predictions. More important, a full description of body dynamics involves many factors beyond FCT and includes modes such as pitching and longitudinal dynamics known to be inherently unstable in open loop conditions (23, 24) and subject to active control (25, 26). Finally, yaw damping due to FCT is a feature of flapping flight that is not found in human-made fixed-wing or rotary-wing flyers and may lead to improvements in the stability and maneuverability of biomimetic micro-air vehicles. 11. S. P. Sane, J. Exp. Biol. 206, 4191 (2003). 12. J. R. Usherwood, C. P. Ellington, J. Exp. Biol. 205, 1565 Synonymous mutations do not alter the encoded protein, but they can influence gene expression. To investigate how, we engineered a synthetic library of 154 genes that varied randomly at synonymous sites, but all encoded the same green fluorescent protein (GFP). When expressed in Escherichia coli, GFP protein levels varied 250-fold across the library. GFP messenger RNA (mRNA) levels, mRNA degradation patterns, and bacterial growth rates also varied, but codon bias did not correlate with gene expression. Rather, the stability of mRNA folding near the ribosomal binding site explained more than half the variation in protein levels. In our analysis, mRNA folding and associated rates of translation initiation play a predominant role in shaping expression levels of individual genes, whereas codon bias influences global translation efficiency and cellular fitness. T he theory of codon bias posits that preferred codons correlate with the abundances of iso-accepting tRNAs (1, 2) and thereby increase translational efficiency (3) and accuracy (4). Recent experiments have revealed other effects of silent mutations (5-7). We synthesized a library of green fluorescent protein (GFP) genes that varied randomly in their codon usage, but encoded the same amino acid sequence (8). By placing these constructs in identical regulatory contexts and measuring their expression, we isolated the effects of synonymous variation on gene expression. The GFP gene consists of 240 codons. For 226 of these codons, we introduced random silent mutations in the third base position, while keeping the first and second positions constant We expressed the GFP genes in E. coli using a T7-promoter vector, and we quantified expression by spectrofluorometry. Fluorescence levels varied 250-fold across the library, and they were highly reproducible for each GFP construct (Spearman r = 0.98 between biological replicates)

El Niño: North Effects in the Eastern Subarctic Pacific Ocean ( Washington Sea Grant Program

in number. If, as we think, the frequency of disturbances may be increasing, then more sophisticated programs are needed to achieve better understanding of how harvested populations or entire ecosystems respond to climate variations. The coastal seas are one of the most valuable and vulnerable of Earth's habitats. Significant inputs of nutrients to the coastal zone arrive via rivers, groundwater, and the atmosphere. Nutrient fluxes through these routes have been increased by human activity. In addition, the N:P:Si ratios of these inputs have been perturbed, and many coastal management practices exacerbate these perturbations. There is evidence of impacts arising from these changes (in phytoplankton numbers and relative species abundance, and deepwater oxygen declines) in areas of restricted water exchange. Elsewhere, the nutrient fluxes through the coastal zone appear to be still dominated by large inputs from the open ocean, and there is little evidence of anthropogenic perturbations. The coastal seas are one of the most important areas of the world oceans from a human perspective. We use these areas for food supplies via fishing, with almost all the world's fish catch coming from coastal waters and adjacent upwellings (1); as a source of nonrenewable (such as hydrocarbons and sand and gravel extraction) and renewable resources; and for power and transportation (2), as well as for waste disposal and for recreation. In a recent attempt to value the world's ecosytems (3), coastal seas were assigned a higher value than the whole terrestrial or open ocean system, despite their much smaller area. Almost all this value is associated with the storage and cycling of the nutrients N and P. The approach and conclusions of this study (3) are open to criticism, because it is not possible to value a

14. E. Suss-Toby

Moreover, the binding of the extracellular domains of adhesins to host cell surface receptors remains incompletely characterized, as are the molecular interactions that govern processing by proteases. Judging from their deep branching evolutionary position and present-day success, apicomplexans are likely to be with us for some time. Thus far, our glimpses into parasite motility have revealed a very different process than that used by mammalian cells. Although these differences may explain the tremendous success of apicomplexans, their understanding may also enable selective disruption of parasite motility. If we are to thwart these ancient and mysterious parasites, our attention should be focused on defining their unique biology. The acquisitions of mitochondria and plastids were important events in the evolution of the eukaryotic cell, supplying it with compartmentalized bioenergetic and biosynthetic factories. Ancient invasions by eubacteria through symbiosis more than a billion years ago initiated these processes. Advances in geochemistry, molecular phylogeny, and cell biology have offered insight into complex molecular events that drove the evolution of endosymbionts into contemporary organelles. In losing their autonomy, endosymbionts lost the bulk of their genomes, necessitating the evolution of elaborate mechanisms for organelle biogenesis and metabolite exchange. In the process, symbionts acquired many host-derived properties, lost much of their eubacterial identity, and were transformed into extraordinarily diverse organelles that reveal complex histories that we are only beginning to decipher. Analyses of mitochondrial genes and their genomic organization and distribution indicate that mitochondrial genomes are derived from an ␣-proteobacterium-like ancestor, probably due to a single ancient invasion (Fig