Habitat structure: a fundamental concept and framework for urban soil ecology

Habitat structure is defined as the composition and arrangement of physical matter at a location. Although habitat structure is the physical template underlying ecological patterns and processes, the concept is relatively unappreciated and underdeveloped in ecology. However, it provides a fundamental concept for urban ecology because human activities in urban ecosystems are often targeted toward management of habitat structure. In addition, the concept emphasizes the fine-scale, on-the-ground perspective needed in the study of urban soil ecology. To illustrate this, urban soil ecology research is summarized from the perspective of habitat structure effects. Among the key conclusions emerging from the literature review are: (1) habitat structure provides a unifying theme for multivariate research about urban soil ecology; (2) heterogeneous urban habitat structures influence soil ecological variables in different ways; (3) more research is needed to understand relationships among sociological variables, habitat structure patterns and urban soil ecology. To stimulate urban soil ecology research, a conceptual framework is presented to show the direct and indirect relationships among habitat structure and ecological variables. Because habitat structure serves as a physical link between sociocultural and ecological systems, it can be used as a focus for interdisciplinary and applied research (e.g., pest management) about the multiple, interactive effects of urbanization on the ecology of soils

Effect of Urbanization on Vegetation in Riparian Area: Plant Communities in Artificial and Semi-Natural Habitats

Riparian areas are local hot spots of biodiversity that are vulnerable and easily degraded. Comparing plant communities in habitats with different degrees of urbanization may provide valuable information for the management and restoration of these vulnerable habitats. In this study, we explored the impact of urbanization on vegetation communities between artificial and semi-natural habitats within two rivers with different levels of development. We compared species richness, types of vegetation, and composition patterns of the plants in our study. In artificial habitats, the sites with relatively high levels of urbanization had the highest species richness, while in semi-natural habitats, the highest species richness was recorded in the less urbanized sites. Furthermore, every component of urbanization that contributed to the variation of species richness was examined in the current study. In artificial habitats, the proportion of impervious surface was the strongest predictor of the variation in species richness and was associated with the richness of alien, native, and riparian species. In semi-natural habitats, most of the richness of alien and native species were associated with the distance to the city center, and the number of riparian and ruderal species was significantly related to the proportion of impervious surface. Moreover, we found that a high level of urbanization was always associated with a large abundance of alien and ruderal species in both artificial and in semi-natural habitats. We recommend the methods of pair comparison of multiple rivers to analyze the impact of urbanization on plant species in riparian areas and have suggested various management actions for maintaining biodiversity and sustainability in riparian ecosystems

Indirect effects of excessive deer browsing through understory vegetation on stream insect assemblages

Over the past decade, the abundance of sika deer has rapidly increased around Japan. Previous studies have showed overabundance of deer causes drastic reduction of forest understory vegetation, leading excessive soil erosion. However, no study has investigated the effects of excessive deer browsing on aquatic insect assemblages via sediment runoff. These effects are important to understand whether the terrestrial alteration by deer influences aquatic ecosystems. In a primary deciduous forest catchment in Ashiu, Kyoto, a deer exclusion fence has been in place since 2006. We compared forest floor cover, overland flow, stream environment, and aquatic insect assemblages in first-order streams and catchments inside and outside of the deer-exclosure from May-2008 to April-2009. The floor inside the deer-exclosure catchment was covered by lush understory vegetation, whereas outside was almost bare. The overland flow runoff rate at midslope and the dominancy of fine sediment deposition in the streambed were higher outside than inside. Among aquatic insects, burrowers, which are tolerant against fine sediment deposition, were significantly more abundant outside than inside, whereas clingers exhibited the opposite patterns. Collector-gatherers, which feed on fine detritus, were significantly more abundant outside than inside. Meanwhile, filterers were more abundant inside. The Simpson’s diversity index of the aquatic insect assemblages was higher inside than outside. These results suggest that the demise of understory vegetation due to excessive deer browsing has indirectly caused changes in the aquatic insect assemblages of this catchment via increased sediment runoff and subsequent sandy sedimentation of the streambed

Effect of Anthropogenic Disturbance on Floristic Homogenization in the Floodplain Landscape: Insights from the Taxonomic and Functional Perspectives

Anthropogenic disturbances pose significant threats to biodiversity. However, limited information has been acquired regarding the degree of impact human disturbance has on the β-diversity of plant assemblages, especially in threatened ecosystems (e.g., floodplains). In the present study, the effects of anthropogenic disturbance on plant communities of floodplain areas (the Miya River, Mie Prefecture, Japan) were analyzed. The taxonomic and functional β-diversity among different degradation levels were compared, and the differences were assessed by tests for homogeneity in multivariate dispersions. In addition, the effects of non-native species and environmental factors on β-diversity were analyzed. As revealed from the results, anthropogenic disturbance led to taxonomic homogenization at a regional scale. The increase in non-native invasions tended to improve homogenization, whereas at a low degradation level, the occurrence of non-natives species was usually related to taxonomic differentiation. Furthermore, though the increase in non-natives and environmental parameters significantly affected the β-diversity of the floodplain area, environmental factors may be of more crucial importance than biotic interactions in shaping species assemblages in this study. The previously mentioned result is likely to be dependent on the research scale and the extent to which floodplains are disturbed. Given the significant importance of floodplains, the significance of looking at floodplains in the different levels of degradation was highlighted, and both invasion of non-native species and environmental factors should be considered to gain insights into the response of ecosystems to anthropogenic disturbance. The findings of this study suggested that conservation programs in floodplain areas should place more emphasis on the preservation of natural processes and forest resources

Ecological functions of persistent Japanese cedar litter in structuring stream macroinvertebrate assemblages

Stream macroinvertebrate assemblages are expected to be affected by the abundance and constitution of litter from surrounding forests. We compared forest floor cover, overland flow, stream environment, and stream macroinvertebrate assemblages between the catchments of a Japanese cedar plantation (CP) and a primary deciduous forest (DF). Both systems experience excessive deer browsing. Understory vegetation cover was higher in the DF than in the CP in summer, although cover was low (<20 %), possibly because of excessive deer browsing. Litter cover was much higher in the CP than in the DF in summer as a result of the long abscission period, slow breakdown, and low rate of dispersal of Japanese cedar litter compared to deciduous litter. Monthly overland flow was always lower in the CP than in the DF, and substrate size was smaller in the DF stream. In the CP, cedar litter accumulated in the stream, probably because of its low breakdown rate and morphology, and abundant shredder taxa characterized the macroinvertebrate assemblage. In contrast, abundant burrower taxa characterized the macroinvertebrate assemblage in the DF stream. These results imply that Japanese cedar litter functions in structuring the macroinvertebrate assemblage by supplying persistent food resources for detritivores, and by buffering fine sedimentation via overland flow under excessive deer browsing