7 research outputs found
Automated image analysis for quantification of filamentous bacteria
- Author
- Aalborg University
- Aarhus University
- Department of Chemistry and Bioscience
- Fredborg Marlene
- Koninklijke Philips N.V.
- Kroghsbo Stine
- Plant and Fungal Biotechnology
- Regional Hospital Southern Denmark
- Rosenvinge Flemming S.
- Section for Bioscience and Engineering
- Section of Biotechnology
- Sondergaard Teis E.
- Spillum Erik
- The Faculty of Engineering and Science
- The Faculty of Engineering and Science (ENG)
- Wang Mikala
- Publication venue
- Figshare
- Publication date
- 01/01/2015
- Field of study
Abstract Background Antibiotics of the β-lactam group are able to alter the shape of the bacterial cell wall, e.g. filamentation or a spheroplast formation. Early determination of antimicrobial susceptibility may be complicated by filamentation of bacteria as this can be falsely interpreted as growth in systems relying on colorimetry or turbidometry (such as Vitek-2, Phoenix, MicroScan WalkAway). The objective was to examine an automated image analysis algorithm for quantification of filamentous bacteria using the 3D digital microscopy imaging system, oCelloScope. Results Three E. coli strains displaying different resistant profiles and differences in filamentation kinetics were used to study a novel image analysis algorithm to quantify length of bacteria and bacterial filamentation. A total of 12 β-lactam antibiotics or β-lactam–β-lactamase inhibitor combinations were analyzed for their ability to induce filamentation. Filamentation peaked at approximately 120 min with an average cell length of 30 μm. Conclusion The automated image analysis algorithm showed a clear ability to rapidly detect and quantify β-lactam-induced filamentation in E. coli. This rapid determination of β-lactam-mediated morphological alterations may facilitate future development of fast and accurate AST systems, which in turn will enable early targeted antimicrobial therapy. Therefore, rapid detection of β-lactam-mediated morphological changes may have important clinical implications
Additional file 1: of Automated image analysis for quantification of filamentous bacteria
- Author
- Aalborg University
- Aarhus University
- Department of Chemistry and Bioscience
- Fredborg Marlene
- Koninklijke Philips N.V.
- Kroghsbo Stine
- Plant and Fungal Biotechnology
- Regional Hospital Southern Denmark
- Rosenvinge Flemming S.
- Section for Bioscience and Engineering
- Section of Biotechnology
- Sondergaard Teis E.
- Spillum Erik
- The Faculty of Engineering and Science
- The Faculty of Engineering and Science (ENG)
- Wang Mikala
- Publication venue
- Figshare
- Publication date
- 14/11/2015
- Field of study
Piperacillin-induced filamentation in E. coli . The time-lapse movies show E. coli treated with piperacillin (PIP, 64 mg/L) and without (Positive control), respectively; as well as graphs showing growth and average length of the bacteria. (MOV 4671 kb
Automated image analysis for quantification of filamentous bacteria
- Author
- Aalborg University
- Aarhus University
- Department of Chemistry and Bioscience
- Fredborg Marlene
- Koninklijke Philips N.V.
- Kroghsbo Stine
- Plant and Fungal Biotechnology
- Regional Hospital Southern Denmark
- Rosenvinge Flemming S.
- Section for Bioscience and Engineering
- Section of Biotechnology
- Sondergaard Teis E.
- Spillum Erik
- The Faculty of Engineering and Science
- The Faculty of Engineering and Science (ENG)
- Wang Mikala
- Publication venue
- Figshare
- Publication date
- 01/01/2015
- Field of study
Abstract Background Antibiotics of the β-lactam group are able to alter the shape of the bacterial cell wall, e.g. filamentation or a spheroplast formation. Early determination of antimicrobial susceptibility may be complicated by filamentation of bacteria as this can be falsely interpreted as growth in systems relying on colorimetry or turbidometry (such as Vitek-2, Phoenix, MicroScan WalkAway). The objective was to examine an automated image analysis algorithm for quantification of filamentous bacteria using the 3D digital microscopy imaging system, oCelloScope. Results Three E. coli strains displaying different resistant profiles and differences in filamentation kinetics were used to study a novel image analysis algorithm to quantify length of bacteria and bacterial filamentation. A total of 12 β-lactam antibiotics or β-lactam–β-lactamase inhibitor combinations were analyzed for their ability to induce filamentation. Filamentation peaked at approximately 120 min with an average cell length of 30 μm. Conclusion The automated image analysis algorithm showed a clear ability to rapidly detect and quantify β-lactam-induced filamentation in E. coli. This rapid determination of β-lactam-mediated morphological alterations may facilitate future development of fast and accurate AST systems, which in turn will enable early targeted antimicrobial therapy. Therefore, rapid detection of β-lactam-mediated morphological changes may have important clinical implications
Real-Time Monitoring of <i>Streptococcus mutans</i> Biofilm Formation Using a Quartz Crystal Microbalance
- Author
- Publication venue
- 'S. Karger AG'
- Publication date
- Field of study
Afro-Eurasian mammalian fauna and early hominin dispersals
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- A. Turner
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- D. Geraads
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- 'Springer Science and Business Media LLC'
- Publication date
- 01/01/2007
- Field of study
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- W.S. Man
- W.S. Pelouch
- W.S. Pelouch
- W.T. Ham Jr
- W.T. Hu
- W.W. Chow
- W.W. Ge
- W.W. Hsiang
- W.W. KrĂĽhler
- W.W. Morey
- W.W. Rigrod
- W.W. Rigrod
- W.W. Rigrod
- W.W. Simmons
- W.W. Tang
- W.X. Li
- X. Feng
- X. Gao
- X. J. Wang
- X. Li
- X. Liu
- X. Liu
- X. Liu
- X. Mateos
- X. Peng
- X. Zhang
- X.A. Rameix
- X.D. Mu
- X.D. Mu
- X.D. Yang
- X.F. Chen
- X.G. Deng
- X.G. Huang
- X.G. Huang
- X.G. Sun
- X.H. Lu
- X.H. Zhang
- X.J. Guo
- X.L. Zhang
- X.M. Tong
- X.S. Bourzeix
- X.S. Zhu
- X.Y. Chen
- X.Y. Dong
- X.Y. Dong
- X.Y. Peng
- X.Y. Zhang
- X.Y. Zhang
- X.Y. Zhang
- X.Y. Zhang
- Y. Asakawa
- Y. Assor
- Y. Barbarin
- Y. Ben
- Y. Beregovski
- Y. Bo
- Y. Dong
- Y. Feng
- Y. Hirano
- Y. Hirano
- Y. Hironaka
- Y. Huang
- Y. Inoue
- Y. Ishida
- Y. Ishida
- Y. Isyanova
- Y. J. Cai
- Y. Jeong
- Y. Jeong
- Y. Jeong
- Y. Jingguo
- Y. Joeng
- Y. Kalisky
- Y. Kalisky
- Y. Kida
- Y. Li
- Y. Liao
- Y. Liao
- Y. Louyer
- Y. Louyer
- Y. Lutz
- Y. Mita
- Y. Morishige
- Y. Nabekawa
- Y. Nabekawa
- Y. Nabekawa
- Y. Nabekawa
- Y. Nabekawa
- Y. Nabekawa
- Y. Nabekawa
- Y. Nabekawa
- Y. Nagumo
- Y. Nishida
- Y. Ojima
- Y. Oki
- Y. Oki
- Y. Oki
- Y. Pang
- Y. Sato
- Y. Shimony
- Y. Shimony
- Y. Shimony
- Y. Sidorin
- Y. Silberberg
- Y. Takenaka
- Y. Takenaka
- Y. Tzuk
- Y. Uchiyama
- Y. Urata
- Y. Urata
- Y. Yang
- Y. Zaouter
- Y.A. He
- Y.C. Zhao
- Y.C. Zhao
- Y.C. Zhao
- Y.E. Romanyuk
- Y.E. Young
- Y.F. Chen
- Y.F. Chen
- Y.F. Chen
- Y.F. Chen
- Y.F. Chen
- Y.F. Chen
- Y.F. Chen
- Y.F. Chen
- Y.F. Chen
- Y.F. Chen
- Y.F. Chen
- Y.F. Chen
- Y.F. Chen
- Y.F. Chen
- Y.F. Qi
- Y.H. Cha
- Y.H. Tsang
- Y.J. Cai
- Y.J. Chen
- Y.J. Cheng
- Y.J. Deng
- Y.J. Dong
- Y.J. Zhang
- Y.K. Kuo
- Y.K. Kuo
- Y.K. Kuo
- Y.K. Park
- Y.L. Li
- Y.L. Li
- Y.L. Li
- Y.L. Sun
- Y.M. Chang
- Y.M. Chen
- Y.M. Liu
- Y.M. Liu
- Y.N. Xu
- Y.P. Huo
- Y.P. Tong
- Y.S. Liu
- Y.V. Volk
- Y.W. Lee
- Y.X. Fan
- Y.X. Zhao
- Y.Y. Lin
- Yu. Nizienko
- Z. Burshtein
- Z. Dai
- Z. Hricha
- Z. Li
- Z. Zeng
- Z. Zhang
- Z.A. Yasa
- Z.G. Zhang
- Z.G. Zhang
- Z.G. Zhang
- Z.H.H. Yang
- Z.L. Liu
- Z.P. Sun
- Z.P. Sun
- Z.T. Chen
- Z.Y. Li
- Z.z. Xu
- Zs. Bor
- Zs. Bor
- {Sect. 6.13.5}
- Publication venue
- 'Springer Science and Business Media LLC'
- Publication date
- 01/01/2007
- Field of study
α1-Adrenergic signaling mechanisms in contraction of resistance arteries
- Author
- A. Arnon
- A. Bonev
- A. Horowitz
- A. Horowitz
- A. Persechini
- A. Rokolya
- A. Schwartz
- A.B. Bradley
- A.J. Halayko
- A.J. Whitmarsh
- A.K. Cook
- A.K. Grover
- A.P. Albert
- A.P. Braun
- A.P. Somlyo
- A.P. Somlyo
- A.R. Dunn
- A.S. Aromolaran
- A.V. Shmigol
- A.V. Somlyo
- A.V. Somlyo
- B. Himpens
- B. Leinweber
- B. Zimmermann
- B.D. Leinweber
- C. Breeman Van
- C. Cauvin
- C. Dessy
- C. Lamont
- C. Sutherland
- C.-H. Lee
- C.-H. Lee
- C.-M. Hai
- C.-M. Hai
- C.B. Menice
- C.D. Benham
- C.L. Buus
- C.M. Crowley
- D. Alessi
- D. Chin
- D. Johnson
- D. Parthimos
- D. Xiao
- D.B. Sacks
- D.H.D. Nguyen
- D.J. Beech
- D.J. Hartshorne
- D.L. Morrison
- D.O. Ruehlmann
- D.P. Gitterman
- D.P. Wilson
- D.V. Gordienko
- D.V. Gordienko
- D.V. Gordienko
- E. Bavel Van
- E. Bavel Van
- E. Suematsu
- E. Zelcer
- E.R. Flynn
- F. Coussin
- F. Wuytack
- F.-X. Boittin
- F.L. Wills
- F.V. Brozovich
- G. D’Angelo
- G. Fleckenstein-Grun
- G. Julou-Schaeffer
- G. Notarianni
- G.D. Hirst
- G.J. Lagaud
- H. Gustafsson
- H. Karaki
- H. Katsuyama
- H. Nagumo
- H. Nilsson
- H. Peng
- H. Rasmussen
- H. Schulman
- H. Suenaga
- H. Yoshikawa
- H. Zhong
- H. Zou
- H.A. Singer
- H.A. Singer
- H.A. Singer
- H.D. Je
- H.J. Knot
- H.M. Shin
- I. Baro
- I. Baro
- I. Gorenne
- I. Kim
- I.A. Greenwood
- I.A. Yamboliev
- J. Abe
- J. Feng
- J. Hulvershorn
- J. Mauban
- J. Nishimura
- J. Zhang
- J.A. MacDonald
- J.C. Hedges
- J.C. Ruegg
- J.C. Ruegg
- J.D. Johnson
- J.D. Matthew
- J.G. McCaron
- J.G. McGeown
- J.H. Jaggar
- J.H. Jaggar
- J.H. Jaggar
- J.H. Jaggar
- J.H. Jaggar
- J.J. Earley
- J.M. Chalovich
- J.M. Diver
- J.P. Morgan
- J.P. Morgan
- J.R. Haeberle
- J.R. Lopez-Lopez
- J.R. Sellers
- J.T. Deng
- J.X. Bao
- K. Deisseroth
- K. Dreja
- K. Ichikawa
- K. Ichikawa
- K. Kimura
- K. Luby-Phelps
- K. Mabuchi
- K. Matrougui
- K. Miyazaki
- K. Morishige
- K. Nobe
- K. Sato
- K. Takahashi
- K.D. Meisheri
- K.E. Kamm
- K.E. Kamm
- K.G. Morgan
- K.M. Sanders
- K.S. Hwang
- L. Baro
- L. Brocke
- L. Brocke
- L. Li
- L. Missiaen
- L.A. Blatter
- L.A. Merkel
- L.P. Adam
- L.P. Weber
- M. Amano
- M. Chatterjee
- M. Eto
- M. Eto
- M. Gimona
- M. Gimona
- M. Gimona
- M. Gimona
- M. Hoth
- M. Iino
- M. Iino
- M. Ikebe
- M. Lohn
- M. Lohn
- M. Mezgueldi
- M. Mita
- M. Omote
- M. Quadroni
- M. Sell
- M. Srinivasan
- M. Uehata
- M.C. Gong
- M.E. Hemric
- M.G. Tansey
- M.J. Jiang
- M.J. Jiang
- M.J. Mulvany
- M.J. Siegman
- M.J. Taggart
- M.J. Taggart
- M.J. Taggart
- M.P. Blaustein
- M.P. Blaustein
- M.T. Nelson
- M.T. Nelson
- N.I. Gokina
- N.I. Gokina
- N.R. Danthuluri
- N.V. Bogatcheva
- O. Stepien
- P. Koninck De
- P. Lin
- P. Papageorgiou
- P.A. Zweiten Van
- P.D. Wagner
- P.F. Dillon
- P.K. Ngai
- P.M. Bayley
- P.W. Shaul
- Q. Xu
- R. Brenner
- R. Flemming
- R. Janiak
- R.A. Khalil
- R.A. Khalil
- R.A. Khalil
- R.A. Murphy
- R.B. Pearson
- R.E. Lesh
- R.E. Roberts
- R.J. Colbran
- R.M. Tribe
- R.S. Garcha
- S. Marston
- S. Mii
- S. Moreland
- S. Moreland
- S. Sakurada
- S. Senba
- S. Tseng
- S. Zhuang
- S.B. Marston
- S.B. Marston
- S.J. Gunst
- S.J. Gunst
- S.J. Gunst
- S.J. Moreland
- S.J. Winder
- S.S. Bolz
- S.T. Abraham
- S.W. Watts
- T. Aburto
- T. Ashida
- T. Hamaguchi
- T. Kaneko
- T. Kitazawa
- T. Kitazawa
- T. Mino
- T.B. Vyas
- T.J. Batchelor
- T.M. Curtis
- T.P. Woodsome
- T.R. Soderling
- U.D. Sohn
- V. Miriel
- V. Ohanian
- V. Pucovsky
- V.A. Golovina
- V.P. Shirinsky
- W.-J. Zang
- W.G. Wier
- W.T. Gerthoffer
- W.T. Gerthoffer
- Y. Asada
- Y. Kanmura
- Y. Kasai
- Y. Kureishi
- Y. Li
- Y. Mukai
- Y. Naito
- Y. Takeuchi
- Y.-H. Lee
- Y.-H. Lee
- Z. Wang
- Z.M. Goeckeler
- Publication venue
- 'Springer Science and Business Media LLC'
- Publication date
- Field of study