Deep-water Buccinidae (Gastropoda: Neogastropoda) from sunken wood, vents and seeps: molecular phylogeny and taxonomy

International audienceBuccinidae-like other canivorous and predatory molluscs-are generally considered to be occasional visitors or rare colonizers in deep-sea biogenic habitats. However, casual observations during tropical deep-sea cruises suggest that associations between buccinids and sunken wood, in particular, are not fortuitous. Enigmatocolus monnieri has been found to co-occur in Madagascar with bathymodiolines, vesicomyids and solemyids, indicating the presence of seeps, and species of Thermosipho gen. nov. have been sampled by submersibles and ROVs, exclusively from hydrothermal vents. A molecular phylogeny (based on CO1, 12S and 28S genes) reveals that buccinid genera potentially associated with sunken wood (Eosipho, Gaillea gen. nov., Calagrassor gen. nov., and Manaria) are closely related to taxa from vents (Thermosipho gen. nov.) and seeps (Enigmaticolus). The anatomy of several dissected species did not reveal any special trait that could be interpreted as a special adaptation to biogenic substrates. Buccinids from sunken wood are most diverse in the Indopacific centre of marine biodiversity, the "Coral Triangle", at depths between 100 and 1000 meters, with numerous species still undescribed

Comparison of Recombinant Human Haptocorrin Expressed in Human Embryonic Kidney Cells and Native Haptocorrin

Haptocorrin (HC) is a circulating corrinoid binding protein with unclear function. In contrast to transcobalamin, the other transport protein in blood, HC is heavily glycosylated and binds a variety of cobalamin (Cbl) analogues. HC is present not only in blood but also in various secretions like milk, tears and saliva. No recombinant form of HC has been described so far. We report the expression of recombinant human HC (rhHC) in human embryonic kidney cells. We purified the protein with a yield of 6 mg (90 nmol) per litre of cell culture supernatant. The isolated rhHC behaved as native HC concerning its spectral properties and ability to recognize both Cbl and its baseless analogue cobinamide. Similar to native HC isolated from blood, rhHC bound to the asialoglycoprotein receptor only after removal of terminal sialic acid residues by treatment with neuraminidase. Interestingly, rhHC, that compared to native HC contains four excessive amino acids (…LVPR) at the C-terminus, showed subtle changes in the binding kinetics of Cbl, cobinamide and the fluorescent Cbl conjugate CBC. The recombinant protein has properties very similar to native HC and although showing slightly different ligand binding kinetics, rhHC is valuable for further biochemical and structural studies

The Weyl bundle as a differentiable manifold

Construction of an infinite dimensional differentiable manifold ${\mathbb R}^{\infty}$ not modelled on any Banach space is proposed. Definition, metric and differential structures of a Weyl algebra and a Weyl algebra bundle are presented. Continuity of the $\circ$-product in the Tichonov topology is proved. Construction of the $*$-product of the Fedosov type in terms of theory of connection in a fibre bundle is explained.Comment: 31 pages; revised version - some typoes have been eliminated, notation has been simplifie

Stargenfunctions, generally parametrized systems and a causal formulation of phase space quantum mechanics

We address the deformation quantization of generally parametrized systems displaying a natural time variable. The purpose of this exercise is twofold: first, to illustrate through a pedagogical example the potential of quantum phase space methods in the context of constrained systems and particularly of generally covariant systems. Second, to show that a causal representation for quantum phase space quasidistributions can be easily achieved through general parametrization. This result is succinctly discussed.Comment: 19 pages, to appear in J. Math. Phy

The Cobalamin-Binding Protein in Zebrafish Is an Intermediate between the Three Cobalamin-Binding Proteins in Human

In humans, three soluble extracellular cobalamin-binding proteins; transcobalamin (TC), intrinsic factor (IF), and haptocorrin (HC), are involved in the uptake and transport of cobalamin. In this study, we investigate a cobalamin-binding protein from zebrafish (Danio rerio) and summarize current knowledge concerning the phylogenetic evolution of kindred proteins. We identified a cobalamin binding capacity in zebrafish protein extracts (8.2 pmol/fish) and ambient water (13.5 pmol/fish) associated with a single protein. The protein showed resistance toward degradation by trypsin and chymotrypsin (like human IF, but unlike human HC and TC). The cobalamin analogue, cobinamide, bound weaker to the zebrafish cobalamin binder than to human HC, but stronger than to human TC and IF. Affinity for another analogue, adenosyl-pseudo-cobalamin was low compared with human HC and TC, but high compared with human IF. The absorbance spectrum of the purified protein in complex with hydroxo-cobalamin resembled those of human HC and IF, but not TC. We searched available databases to further explore the phylogenies of the three cobalamin-binding proteins in higher vertebrates. Apparently, TC-like proteins are the oldest evolutionary derivatives followed by IF and HC (the latter being present only in reptiles and most but not all mammals). Our findings suggest that the only cobalamin-binding protein in zebrafish is an intermediate between the three human cobalamin binders. These findings support the hypothesis about a common ancestral gene for all cobalamin-binding proteins in higher vertebrates

Weyl-Underhill-Emmrich quantization and the Stratonovich-Weyl quantizer

Weyl-Underhill-Emmrich (WUE) quantization and its generalization are considered. It is shown that an axiomatic definition of the Stratonovich-Weyl (SW) quantizer leads to severe difficulties. Quantization on the cylinder within the WUE formalism is discussed.Comment: 15+1 pages, no figure

∗\ast-SDYM Fields and Heavenly Spaces. I. ∗\ast-SDYM equations as an integrable system

It is shown that the self-dual Yang-Mills (SDYM) equations for the $\ast$-bracket Lie algebra on a heavenly space can be reduced to one equation (the \it master equation\rm). Two hierarchies of conservation laws for this equation are constructed. Then the twistor transform and a solution to the Riemann-Hilbert problem are given.Comment: 25 page

Deformation Quantization of Geometric Quantum Mechanics

Second quantization of a classical nonrelativistic one-particle system as a deformation quantization of the Schrodinger spinless field is considered. Under the assumption that the phase space of the Schrodinger field is $C^{\infty}$, both, the Weyl-Wigner-Moyal and Berezin deformation quantizations are discussed and compared. Then the geometric quantum mechanics is also quantized using the Berezin method under the assumption that the phase space is $CP^{\infty}$ endowed with the Fubini-Study Kahlerian metric. Finally, the Wigner function for an arbitrary particle state and its evolution equation are obtained. As is shown this new "second quantization" leads to essentially different results than the former one. For instance, each state is an eigenstate of the total number particle operator and the corresponding eigenvalue is always ${1 \over \hbar}$.Comment: 27+1 pages, harvmac file, no figure

Uncertainty Relations in Deformation Quantization

Robertson and Hadamard-Robertson theorems on non-negative definite hermitian forms are generalized to an arbitrary ordered field. These results are then applied to the case of formal power series fields, and the Heisenberg-Robertson, Robertson-Schr\"odinger and trace uncertainty relations in deformation quantization are found. Some conditions under which the uncertainty relations are minimized are also given.Comment: 28+1 pages, harvmac file, no figures, typos correcte