Expression of PEG11 and PEG11AS transcripts in normal and callipyge sheep

BACKGROUND: The callipyge mutation is located within an imprinted gene cluster on ovine chromosome 18. The callipyge trait exhibits polar overdominant inheritance due to the fact that only heterozygotes inheriting a mutant paternal allele (paternal heterozygotes) have a phenotype of muscle hypertrophy, reduced fat and a more compact skeleton. The mutation is a single A to G transition in an intergenic region that results in the increased expression of several genes within the imprinted cluster without changing their parent-of-origin allele-specific expression. RESULTS: There was a significant effect of genotype (p < 0.0001) on the transcript abundance of DLK1, PEG11, and MEG8 in the muscles of lambs with the callipyge allele. DLK1 and PEG11 transcript levels were elevated in the hypertrophied muscles of paternal heterozygous animals relative to animals of the other three genotypes. The PEG11 locus produces a single 6.5 kb transcript and two smaller antisense strand transcripts, referred to as PEG11AS, in skeletal muscle. PEG11AS transcripts were detectable over a 5.5 kb region beginning 1.2 kb upstream of the PEG11 start codon and spanning the entire open reading frame. Analysis of PEG11 expression by quantitative PCR shows a 200-fold induction in the hypertrophied muscles of paternal heterozygous animals and a 13-fold induction in homozygous callipyge animals. PEG11 transcripts were 14-fold more abundant than PEG11AS transcripts in the gluteus medius of paternal heterozygous animals. PEG11AS transcripts were expressed at higher levels than PEG11 transcripts in the gluteus medius of animals of the other three genotypes. CONCLUSIONS: The effect of the callipyge mutation has been to alter the expression of DLK1, GTL2, PEG11 and MEG8 in the hypertrophied skeletal muscles. Transcript abundance of DLK1 and PEG11 was highest in paternal heterozygous animals and exhibited polar overdominant gene expression patterns; therefore, both genes are candidates for causing skeletal muscle hypertrophy. There was unique relationship of PEG11 and PEG11AS transcript abundance in the paternal heterozygous animals that suggests a RNA interference mechanism may have a role in PEG11 gene regulation and polar overdominance in callipyge sheep

The rings of n-dimensional polytopes

Points of an orbit of a finite Coxeter group G, generated by n reflections starting from a single seed point, are considered as vertices of a polytope (G-polytope) centered at the origin of a real n-dimensional Euclidean space. A general efficient method is recalled for the geometric description of G- polytopes, their faces of all dimensions and their adjacencies. Products and symmetrized powers of G-polytopes are introduced and their decomposition into the sums of G-polytopes is described. Several invariants of G-polytopes are found, namely the analogs of Dynkin indices of degrees 2 and 4, anomaly numbers and congruence classes of the polytopes. The definitions apply to crystallographic and non-crystallographic Coxeter groups. Examples and applications are shown.Comment: 24 page

Color Capable Sub-Pixel Resolving Optofluidic Microscope and Its Application to Blood Cell Imaging for Malaria Diagnosis

Miniaturization of imaging systems can significantly benefit clinical diagnosis in challenging environments, where access to physicians and good equipment can be limited. Sub-pixel resolving optofluidic microscope (SROFM) offers high-resolution imaging in the form of an on-chip device, with the combination of microfluidics and inexpensive CMOS image sensors. In this work, we report on the implementation of color SROFM prototypes with a demonstrated optical resolution of 0.66 µm at their highest acuity. We applied the prototypes to perform color imaging of red blood cells (RBCs) infected with Plasmodium falciparum, a particularly harmful type of malaria parasites and one of the major causes of death in the developing world

On the effect of Ti on Oxidation Behaviour of a Polycrystalline Nickel-based Superalloy

Titanium is commonly added to nickel superalloys but has a well-documented detrimental effect on oxidation resistance. The present work constitutes the first atomistic-scale quantitative measurements of grain boundary and bulk compositions in the oxide scale of a current generation polycrystalline nickel superalloy performed through atom probe tomography. Titanium was found to be particularly detrimental to oxide scale growth through grain boundary diffusion

Affine extension of noncrystallographic Coxeter groups and quasicrystals

Unique affine extensions H^{\aff}_2, H^{\aff}_3 and H^{\aff}_4 are determined for the noncrystallographic Coxeter groups $H_2$, $H_3$ and $H_4$. They are used for the construction of new mathematical models for quasicrystal fragments with 10-fold symmetry. The case of H^{\aff}_2 corresponding to planar point sets is discussed in detail. In contrast to the cut-and-project scheme we obtain by construction finite point sets, which grow with a model specific growth parameter.Comment: (27 pages, to appear in J. Phys. A

Reduction of laser intensity scintillations in turbulent atmospheres using time averaging of a partially coherent beam

We demonstrate experimentally and numerically that the application of a partially coherent beam (PCB) in combination with time averaging leads to a significant reduction in the scintillation index. We use a simplified experimental approach in which the atmospheric turbulence is simulated by a phase diffuser. The role of the speckle size, the amplitude of the phase modulation, and the strength of the atmospheric turbulence are examined. We obtain good agreement between our numerical simulations and our experimental results. This study provides a useful foundation for future applications of PCB-based methods of scintillation reduction in physical atmospheres.Comment: 18 pages, 14 figure