Terrestrial structure-from-motion: spatial error analysis of roughness and morphology

Structure-from-Motion (SfM) photogrammetry is rapidly becoming a key tool for morphological characterisation and change detection of the earth surface. This paper demonstrates the use of Terrestrial Structure-from-Motion (TSfM) photogrammetry to acquire morphology and roughness data at the reach-scale in an upland gravel-bed river. We quantify 1) spatially-distributed error in TSfM derived Digital Elevation Models (DEMs) and 2) identify differences in roughness populations acquired from TSfM photogrammetry versus TLS. We identify an association between local topographic variation and error in the TSfM DEM. On flatter surfaces (e.g. bar and terrace surfaces), the difference between the TSfM and TLS DEMs are generally less than ±0.1 m. However, in areas of high topographic variability (>0.4 m) such as berm or terrace edges, differences between the TSfM and TLS DEMs can be up to ±1 m. Our results suggest that grain roughness estimates from the TSfM point cloud generate values twice those derived from the TLS point cloud on coarse berm areas, and up to four-fold those derived from the TLS point cloud over finer gravel bar surfaces. This finding has implications when using SfM data to derive roughness metrics for hydrodynamic modelling. Despite the use of standard filtering procedures, noise pertains in the SfM DEM and the time required for its reduction might partially outweigh the survey efficiency using SfM. Therefore, caution is needed when SfM surveys are employed for the assessment of surface roughness at a reach-scale

Switching from a traditional undergraduate programme in (clinical) pharmacology and therapeutics to a problem-based learning programme

Purpose: The pharmacology and clinical pharmacology and therapeutics (CPT) education during the undergraduate medical curriculum of NOVA Medical School, Lisbon, Portugal, was changed from a traditional programme (i.e. discipline-based, lectures) to a problem-based learning (PBL) programme (i.e. integrated, case-based discussions) without an increase in teaching hours. The aim of this study was to investigate whether this change improved the prescribing competencies of final-year medical students. Methods: Final-year students from both programmes (2015 and 2019) were invited to complete a validated prescribing assessment and questionnaire. The assessment comprised 24 multiple-choice questions in three subdomains (working mechanism, side-effects and interactions/contraindications), and five clinical case scenarios of common diseases. The questionnaire focused on self-reported prescribing confidence, preparedness for future prescribing task and education received. Results: In total, 36 (22%) final-year medical students from the traditional programme and 54 (23%) from the PBL programme participated. Overall, students in the PBL programme had significantly higher knowledge scores than students in the traditional programme (76% (SD 9) vs 67% (SD 15); p = 0.002). Additionally, students in the PBL programme made significantly fewer inappropriate therapy choices (p = 0.023) and fewer erroneous prescriptions than did students in the traditional programme (p = 0.27). Students in the PBL programme felt more confident in prescribing, felt better prepared for prescribing as junior doctor and completed more drug prescriptions during their medical training. Conclusion: Changing from a traditional programme to an integrated PBL programme in pharmacology and CPT during the undergraduate medical curriculum may improve the prescribing competencies of final-year students.publishersversionpublishe

Urinary Acrylonitrile Metabolite Concentrations Before and after Smoked, Vaporized, and Oral Cannabis in Frequent and Occasional Cannabis Users.

Cannabis use through smoking, vaping, or ingestion is increasing, but only limited studies have investigated the resulting exposure to harmful chemicals. N-acetyl-S-(2-cyanoethyl)-L-cysteine (2CYEMA), a urinary metabolite of acrylonitrile, a possible carcinogen, is elevated in the urine of past-30-day cannabis users compared to non-cannabis users. Five frequent and five occasional cannabis users smoked and vaped cannabis on separate days; one also consumed cannabis orally. Urine samples were collected before and up to 72 h post dose and urinary 2CYEMA was quantified. We compared 2CYEMA pre-exposure levels, maximum concentration, time at maximum concentration for occasional versus frequent users following different exposure routes, and measured half-life of elimination. Smoking cannabis joints rapidly (within 10 min) increased 2CYEMA in the urine of occasional cannabis users, but not in frequent users. Urine 2CYEMA did not consistently increase following vaping or ingestion in either study group. Cigarette smokers had high pre-exposure concentrations of 2CYEMA. Following cannabis smoking, the half-lives of 2CYEMA ranged from 2.5 to 9.0 h. 2CYEMA is an effective biomarker of cannabis smoke exposure, including smoke from a single cannabis joint, however, not from vaping or when consumed orally. When using 2CYEMA to evaluate exposure in cannabis users, investigators should collect the details about tobacco smoking, route of consumption, and time since last use as possible covariates

Using geophysical subsurface data for the reconstruction of valley-scale spatio-temporal floodplain evolution: implications for upland river restoration

The use of analogues of previous river styles is highly significant for successful river restoration, yet some existing techniques available to assist practitioners are still not widely applied. We explore the use of Ground Penetrating Radar (GPR), to explore past river styles in an upland river valley in the UK, and explore the potential of the approach to reconstruct former channel pattern. Post-glacial evolution of upland floodplains has been influenced by temporal changes in vegetation, sediment supply and hydrological regime. Channel-floodplain morphodynamics over the Holocene were conditioned by glacial deposits, lateral interaction with slope processes and fluvial sediment reworking, changes in flow and sediment supply regimes driven by climatic change, and more recently direct and indirect anthropogenic activities, e.g. deforestation, floodplain land use and channel modification. Current drives towards river restoration often use floodplain topography as a guide to appraise such a planform state, however, reconstruction of former channel state is often restricted to surface features visible on historic maps and aerial photographs. This research focuses upon the floodplain of the upper Swindale Beck, Lake District, UK, which was recently restored to a planform design based on the recent meander pattern visible in floodplain topography. We show the potential of GPR to reconstruct a wider array of past channel pattern and evolution at a site characterised by largely aggradational conditions and consistent sediment supply from glacial deposits at the valley head. Analysis of GPR data from 40 intersecting GPR survey lines revealed several stratigraphic units, including gravel braidplains, berms, chutes and bars, several levels of larger channels and their layered fill as well as backwater deposits. These were interpreted as braided systems, dynamic wandering planform and single-thread meandering systems with spatial transitions conditioned by tributaries and valley slope. Optically Stimulated Luminescence (OSL) dates in combination with GIS analysis of valley slope, channel gradient and local valley floor aspect allowed the interpretation of individual evolutionary stages of river and floodplain development at Swindale over at least the last millennium and provides links to processes in the wider environment including the role of alluvial fans in supplying sediment and forcing channel migration. Such information can be particularly valuable for restoration projects to aid design of channel dimensions, planform configuration, channel gradient, substrate characteristics and connection with tributaries. While restoration generally aims to resemble a more natural reference state, specific targets may seek to improve a particular set of functionalities (e.g., ecological, flood and sediment management, recreational) which should be resilient to the consequences of ongoing climatic changes and should be achieved sustainably (e.g. locally sourced gravel). Here, GPR-based floodplain analysis provides a non-invasive approach to understand possible evolutionary trajectories and to appraise a wider range of restoration options and sustainable resources

Longer duration entry mitigates nystagmus and vertigo in 7-Tesla MRI

IntroductionPatients and technologists commonly describe vertigo, dizziness, and imbalance near high-field magnets, e.g., 7-Tesla (T) magnetic resonance imaging (MRI) scanners. We sought a simple way to alleviate vertigo and dizziness in high-field MRI scanners by applying the understanding of the mechanisms behind magnetic vestibular stimulation and the innate characteristics of vestibular adaptation.MethodsWe first created a three-dimensional (3D) control systems model of the direct and indirect vestibulo-ocular reflex (VOR) pathways, including adaptation mechanisms. The goal was to develop a paradigm for human participants undergoing a 7T MRI scan to optimize the speed and acceleration of entry into and exit from the MRI bore to minimize unwanted vertigo. We then applied this paradigm from the model by recording 3D binocular eye movements (horizontal, vertical, and torsion) and the subjective experience of eight normal individuals within a 7T MRI. The independent variables were the duration of entry into and exit from the MRI bore, the time inside the MRI bore, and the magnetic field strength; the dependent variables were nystagmus slow-phase eye velocity (SPV) and the sensation of vertigo.ResultsIn the model, when the participant was exposed to a linearly increasing magnetic field strength, the per-peak (after entry into the MRI bore) and post-peak (after exiting the MRI bore) responses of nystagmus SPV were reduced with increasing duration of entry and exit, respectively. There was a greater effect on the per-peak response. The entry/exit duration and peak response were inversely related, and the nystagmus was decreased the most with the 5-min duration paradigm (the longest duration modeled). The experimental nystagmus pattern of the eight normal participants matched the model, with increasing entry duration having the strongest effect on the per-peak response of nystagmus SPV. Similarly, all participants described less vertigo with the longer duration entries.ConclusionIncreasing the duration of entry into and exit out of a 7T MRI scanner reduced or eliminated vertigo symptoms and reduced nystagmus peak SPV. Model simulations suggest that central processes of vestibular adaptation account for these effects. Therefore, 2-min entry and 20-s exit durations are a practical solution to mitigate vertigo and other discomforting symptoms associated with undergoing 7T MRI scans. In principle, these findings also apply to different magnet strengths

Key Learning Outcomes for Clinical Pharmacology and Therapeutics Education in Europe:A Modified Delphi Study

Harmonizing clinical pharmacology and therapeutics (CPT) education in Europe is necessary to ensure that the prescribing competency of future doctors is of a uniform high standard. As there are currently no uniform requirements, our aim was to achieve consensus on key learning outcomes for undergraduate CPT education in Europe. We used a modified Delphi method consisting of three questionnaire rounds and a panel meeting. A total of 129 experts from 27 European countries were asked to rate 307 learning outcomes. In all, 92 experts (71%) completed all three questionnaire rounds, and 33 experts (26%) attended the meeting. 232 learning outcomes from the original list, 15 newly suggested and 5 rephrased outcomes were included. These 252 learning outcomes should be included in undergraduate CPT curricula to ensure that European graduates are able to prescribe safely and effectively. We provide a blueprint of a European core curriculum describing when and how the learning outcomes might be acquired.</p

Evaluation of the 5-ethynyl-1,3,3-trimethyl-3H-indole ligand for molecular materials applications

The modification of conjugated organic compounds with organometallic moieties allows the modulation of the electronic and optoelectronic properties of such compounds and lends them to a variety of material applications. The organometallic complexes [M(Cp′)(L)n] (M = Ru or Fe; Cp′ = cyclopentadiene (Cp) or pentamethylcyclopentadiene (Cp*); (L)n = (PPh3)2 or 1,2-bi(diphenylphosphino)ethane (dppe)) and [M(L)n] (M = Ru; (L)n = (dppe)2 or (P(OEt)3)4; or M = Pt; (L)n = (PEt3)2, (PPh3)2 or tricyclohexylphosphine, (PCy3)2) modified with a 5-ethynyl-1,3,3-trimethyl-3H-indole ligand were prepared and characterised by NMR spectroscopy, IR and single-crystal X-ray diffraction. Cyclic voltammetry and IR spectroelectrochemistry of the ruthenium systems showed a single-electron oxidation localised over the M–C≡C–aryl moiety. The N-heteroatom of the indole ligand showed Lewis base properties and was able to extract a proton from a vinylidene intermediate as well as coordinate to CuI. Examples from the wire-like compounds were also studied by single-molecule break junction experiments but molecular junction formation was not observed. This is most likely attributable to the binding characteristics of the substituted terminal indole groups used here to the gold contacts.</jats:p

Towards molecular electronic devices based on 'all-carbon' wires

Nascent molecular electronic devices based on linear ‘all-carbon’ wires attached to gold electrodes through robust and reliable C–Au contacts are prepared via efficient in situ sequential cleavage of trimethylsilyl end groups from an oligoyne, Me3Si–(C[triple bond, length as m-dash]C)4–SiMe3 (1). In the first stage of the fabrication process, removal of one trimethylsilyl (TMS) group in the presence of a gold substrate, which ultimately serves as the bottom electrode, using a stoichiometric fluoride-driven process gives a highly-ordered monolayer, Au|C[triple bond, length as m-dash]CC[triple bond, length as m-dash]CC[triple bond, length as m-dash]CC[triple bond, length as m-dash]CSiMe3 (Au|C8SiMe3). In the second stage, treatment of Au|C8SiMe3 with excess fluoride results in removal of the remaining TMS protecting group to give a modified monolayer Au|C[triple bond, length as m-dash]CC[triple bond, length as m-dash]CC[triple bond, length as m-dash]CC[triple bond, length as m-dash]CH (Au|C8H). The reactive terminal C[triple bond, length as m-dash]C–H moiety in Au|C8H can be modified by ‘click’ reactions with (azidomethyl)ferrocene (N3CH2Fc) to introduce a redox probe, to give Au|C6C2N3HCH2Fc. Alternatively, incubation of the modified gold substrate supported monolayer Au|C8H in a solution of gold nanoparticles (GNPs), results in covalent attachment of GNPs on top of the film via a second alkynyl carbon–Au σ-bond, to give structures Au|C8|GNP in which the monolayer of linear, ‘all-carbon’ C8 chains is sandwiched between two macroscopic gold contacts. The covalent carbon–surface bond as well as the covalent attachment of the metal particles to the monolayer by cleavage of the alkyne C–H bond is confirmed by surface-enhanced Raman scattering (SERS). The integrity of the carbon chain in both Au|C6C2N3HCH2Fc systems and after formation of the gold top-contact electrode in Au|C8|GNP is demonstrated through electrochemical methods. The electrical properties of these nascent metal–monolayer–metal devices Au|C8|GNP featuring ‘all-carbon’ molecular wires were characterised by sigmoidal I–V curves, indicative of well-behaved junctions free of short circuits