242 research outputs found

    Coulomb Final State Interactions for Gaussian Wave Packets

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    Two-particle like-sign and unlike-sign correlations including Coulomb final state interactions are calculated for Gaussian wave packets emitted from a Gaussian source. We show that the width of the wave packets can be fully absorbed into the spatial and momentum space widths of an effective emission function for plane wave states, and that Coulomb final state interaction effects are sensitive only to the latter, but not to the wave packet width itself. Results from analytical and numerical calculations are compared with recently published work by other authors.Comment: 10 pages Latex, 2 eps-figure

    The role of the quantum dispersion in the Coulomb correction of Bose-Einstein correlations

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    The time dependent Schroedinger equation for two identical and charged pions is solved using wavepacket states. It is shown that the expected Coulomb distortion in the momentum correlation function is obliterated by the dispersion of the localized states, and therefore becomes unobservable.Comment: 10 pages, LaTeX, 2 figures, 0.2 Mb postscript, submitted to Phys. Lett.

    Pseudochemotaxis in inhomogeneous active Brownian systems

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    We study dynamical properties of confined, self-propelled Brownian particles in an inhomogeneous activity profile. Using Brownian dynamics simulations, we calculate the probability to reach a fixed target and the mean first passage time to the target of an active particle. We show that both these quantities are strongly influenced by the inhomogeneous activity. When the activity is distributed such that high-activity zone is located between the target and the starting location, the target finding probability is increased and the passage time is decreased in comparison to a uniformly active system. Moreover, for a continuously distributed profile, the activity gradient results in a drift of active particle up the gradient bearing resemblance to chemotaxis. Integrating out the orientational degrees of freedom, we derive an approximate Fokker-Planck equation and show that the theoretical predictions are in very good agreement with the Brownian dynamics simulations.Comment: 7 pages, 5 figure

    Comparison of stochastic optimization methods for receptor-ligand docking

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    Facilitated diffusion of DNA-binding proteins

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    The diffusion-controlled limit of reaction times for site-specific DNA-binding proteins is derived from first principles. We follow the generally accepted concept that a protein propagates via two competitive modes, a three-dimensional diffusion in space and a one-dimensional sliding along the DNA. However, our theoretical treatment of the problem is new. The accuracy of our analytical model is verified by numerical simulations. The results confirm that the unspecific binding of protein to DNA, combined with sliding, is capable to reduce the reaction times significantly.Comment: 4 pages, 2 figures Nov 22 2005 - accepted for PR
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