Quantification of methane oxidation in the rice rhizosphere using 13C-labelled methane

In this paper isotope ratio mass spectrometry is used to determine the methane (CH4) oxidation fraction in the rhizosphere of intact rice plant-soil systems. Earlier studies on quantification of the methane oxidation were based on inhibition or incubation procedures which strongly interfered with the plant-soil system and resulted in a large variability of the reported fractions, while other studies considered stable isotopes at natural abundance levels to investigate methanotrophy in the rhizosphere of rice. The current work is the first that used 13C-labelled CH4 as additive and calculated the oxidation fraction from the ratio between the added 13C-labelled CH4 and its oxidation product 13CO2. Both labelled gases could be distinguished from the natural abundance percentages. The oxidation fraction for methane was found to be smaller than 7%, suggesting that former approaches overestimate the methane oxidation fraction.

Identifying Children with HEreditary Coagulation disorders (iCHEC): A protocol for a prospective cohort study

Introduction It is challenging to obtain a reliable bleeding history in children who are referred for a suspected inherited bleeding disorder. Bleeding symptoms may be subtle as children face fewer haemostatic challenges compared with adults. In order to standardise bleeding histories, questionnaires have been developed, called bleeding assessment tools (BATs). Although it has been shown that high bleeding scores are associated with the presence of a mucocutaneous bleeding disorder, these BATs lack sensitivity, efficiency and flexibility in the paediatric setting. We developed a new BAT (the iCHEC (identifying Children with HEreditary Coagulation disorders) BAT) to improve on these characteristics. We aim to evaluate the diagnostic accuracy of the iCHEC BAT as a screening tool for children who are suspected for having a bleeding disorder. Methods and analysis This is a prospective cohort study. Children (age 0-18 years) suspected for a bleeding disorder who present at tertiary haematology clinics, and/or their parents/guardians, will be asked to complete the iCHEC BAT. Sensitivity was increased by inclusion of paediatric-specific bleeding symptoms and novel qualitative questions per bleeding symptom. Efficiency was improved by developing a self-administered (online) version of the questionnaire. Flexibility for changes in the bleeding phenotype of developing children was improved by including questions that define when the bleeding symptoms occurred in the past. The diagnostic accuracy of the specific bleeding items will be evaluated by receiver operator characteristic curves, using classification based on the results from laboratory assessment as the reference standard. Analysis of the discriminative power of individual bleeding symptoms will be assessed. Ethics and dissemination The study has been approved by the medical ethics committees of all participating centres in the Netherlands, Canada and the UK. All paediatric subjects and/or their parents/guardians will provide written informed consent. Study results will be submitted for publication in peer-reviewed journals

Clarifying the role of sodium in the silica oligomerization reaction

Silica oligomerization is the key reaction in zeolite synthesis. NaOH is a common additive in the zeolite synthesis that decreases the reaction rate of smaller silica oligomers and also affects the final structure of the zeolite. Here we report a study of the role of sodium in the initial stages of silica oligomerization. We performed ab initio molecular dynamics simulations using ecplicit aqueous solution in order to obtain the free energy profile and study the behavior of sodium during the reaction. Our study confirms that sodium decreases the reaction rates of oligomerization for smaller silica chains. Analysis of the molecular dynamics trajectories shows that sodium does not increase the reaction barriers by direct coordination to the silica. However, sodium is often present in the second solvation shell of the reactive atoms. Correlation between sodium presence in the first or the second shell of the reactive oxygen and a decrease in hydrogen bonding for that oxygen was found for the first reaction step. Therefore, the presence of sodium could contribute to an increase in reaction barriers for silica oligomerization by some rearrangement of the hydrogen bond network of water solution around the reactants