3,442 research outputs found

    BrdU Pulse Labelling In Vivo to Characterise Cell Proliferation during Regeneration and Repair following Injury to the Airway Wall in Sheep

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    The response of S-phase cells labelled with bromodeoxyuridine (BrdU) in sheep airways undergoing repair in response to endobronchial brush biopsy was investigated in this study. Separate sites within the airway tree of anaesthetised sheep were biopsied at intervals prior to pulse labelling with BrdU, which was administered one hour prior to euthanasia. Both brushed and spatially disparate unbrushed (control) sites were carefully mapped, dissected, and processed to facilitate histological analysis of BrdU labelling. Our study indicated that the number and location of BrdU-labelled cells varied according to the age of the repairing injury. There was little evidence of cell proliferation in either control airway tissues or airway tissues examined six hours after injury. However, by days 1 and 3, BrdU-labelled cells were increased in number in the airway wall, both at the damaged site and in the regions flanking either side of the injury. Thereafter, cell proliferative activity largely declined by day 7 after injury, when consistent evidence of remodelling in the airway wall could be appreciated. This study successfully demonstrated the effectiveness of in vivo pulse labelling in tracking cell proliferation during repair which has a potential value in exploring the therapeutic utility of stem cell approaches in relevant lung disease models

    Matter-screened Casimir force and Casimir-Polder force in planar structures

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    Using a recently developed theory of the Casimir force (Raabe C and Welsch D-G 2005 Phys. Rev. A 71 013814), we calculate the force that acts on a plate in front of a planar wall and the force that acts on the plate in the case where the plate is part of matter that fills the space in front of the wall. We show that in the limit of a dielectric plate whose permittivity is close to unity, the force obtained in the former case reduces to the ordinary, i.e., unscreened Casimir-Polder force acting on isolated atoms. In the latter case, the theory yields the Casimir-Polder force that is screened by the surrounding matter.Comment: 11 pages, 1 figure -- published online at J. Opt. B on Nov 16 200

    Inferring the Origin Locations of Tweets with Quantitative Confidence

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    Social Internet content plays an increasingly critical role in many domains, including public health, disaster management, and politics. However, its utility is limited by missing geographic information; for example, fewer than 1.6% of Twitter messages (tweets) contain a geotag. We propose a scalable, content-based approach to estimate the location of tweets using a novel yet simple variant of gaussian mixture models. Further, because real-world applications depend on quantified uncertainty for such estimates, we propose novel metrics of accuracy, precision, and calibration, and we evaluate our approach accordingly. Experiments on 13 million global, comprehensively multi-lingual tweets show that our approach yields reliable, well-calibrated results competitive with previous computationally intensive methods. We also show that a relatively small number of training data are required for good estimates (roughly 30,000 tweets) and models are quite time-invariant (effective on tweets many weeks newer than the training set). Finally, we show that toponyms and languages with small geographic footprint provide the most useful location signals.Comment: 14 pages, 6 figures. Version 2: Move mathematics to appendix, 2 new references, various other presentation improvements. Version 3: Various presentation improvements, accepted at ACM CSCW 201

    Partial identification in the statistical matching problem

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    The statistical matching problem involves the integration of multiple datasets where some variables are not observed jointly. This missing data pattern leaves most statistical models unidentifiable. Statistical inference is still possible when operating under the framework of partially identified models, where the goal is to bound the parameters rather than to estimate them precisely. In many matching problems, developing feasible bounds on the parameters is equivalent to finding the set of positive-definite completions of a partially specified covariance matrix. Existing methods for characterising the set of possible completions do not extend to high-dimensional problems. A Gibbs sampler to draw from the set of possible completions is proposed. The variation in the observed samples gives an estimate of the feasible region of the parameters. The Gibbs sampler extends easily to high-dimensional statistical matching problems.Daniel Ahfock, Saumyadipta Pyne, Sharon X. Lee, Geoffrey J. McLachla

    Model selection in High-Dimensions: A Quadratic-risk based approach

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    In this article we propose a general class of risk measures which can be used for data based evaluation of parametric models. The loss function is defined as generalized quadratic distance between the true density and the proposed model. These distances are characterized by a simple quadratic form structure that is adaptable through the choice of a nonnegative definite kernel and a bandwidth parameter. Using asymptotic results for the quadratic distances we build a quick-to-compute approximation for the risk function. Its derivation is analogous to the Akaike Information Criterion (AIC), but unlike AIC, the quadratic risk is a global comparison tool. The method does not require resampling, a great advantage when point estimators are expensive to compute. The method is illustrated using the problem of selecting the number of components in a mixture model, where it is shown that, by using an appropriate kernel, the method is computationally straightforward in arbitrarily high data dimensions. In this same context it is shown that the method has some clear advantages over AIC and BIC.Comment: Updated with reviewer suggestion

    Casimir-Polder interaction of atoms with magnetodielectric bodies

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    A general theory of the Casimir-Polder interaction of single atoms with dispersing and absorbing magnetodielectric bodies is presented, which is based on QED in linear, causal media. Both ground-state and excited atoms are considered. Whereas the Casimir-Polder force acting on a ground-state atom can conveniently be derived from a perturbative calculation of the atom-field coupling energy, an atom in an excited state is subject to transient force components that can only be fully understood by a dynamical treatment based on the body-assisted vacuum Lorentz force. The results show that the Casimir-Polder force can be influenced by the body-induced broadening and shifting of atomic transitions - an effect that is not accounted for within lowest-order perturbation theory. The theory is used to study the Casimir-Polder force of a ground-state atom placed within a magnetodielectric multilayer system, with special emphasis on thick and thin plates as well as a planar cavity consisting of two thick plates. It is shown how the competing attractive and repulsive force components related to the electric and magnetic properties of the medium, respectively, can - for sufficiently strong magnetic properties - lead to the formation of potential walls and wells.Comment: 16 pages, 6 figures, minor additions and correction

    Fractional-Period Excitations in Continuum Periodic Systems

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    We investigate the generation of fractional-period states in continuum periodic systems. As an example, we consider a Bose-Einstein condensate confined in an optical-lattice potential. We show that when the potential is turned on non-adiabatically, the system explores a number of transient states whose periodicity is a fraction of that of the lattice. We illustrate the origin of fractional-period states analytically by treating them as resonant states of a parametrically forced Duffing oscillator and discuss their transient nature and potential observability.Comment: 10 pages, 6 figures (some with multiple parts); revised version: minor clarifications of a couple points, to appear in Physical Review

    Finite thermal conductivity in 1d lattices

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    We discuss the thermal conductivity of a chain of coupled rotators, showing that it is the first example of a 1d nonlinear lattice exhibiting normal transport properties in the absence of an on-site potential. Numerical estimates obtained by simulating a chain in contact with two thermal baths at different temperatures are found to be consistent with those ones based on linear response theory. The dynamics of the Fourier modes provides direct evidence of energy diffusion. The finiteness of the conductivity is traced back to the occurrence of phase-jumps. Our conclusions are confirmed by the analysis of two variants of this model.Comment: 4 pages, 3 postscript figure

    High-frequency homogenization for periodic media

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    This article is available open access through the publisher’s website at the link below. Copyright @ 2010 The Royal Society.An asymptotic procedure based upon a two-scale approach is developed for wave propagation in a doubly periodic inhomogeneous medium with a characteristic length scale of microstructure far less than that of the macrostructure. In periodic media, there are frequencies for which standing waves, periodic with the period or double period of the cell, on the microscale emerge. These frequencies do not belong to the low-frequency range of validity covered by the classical homogenization theory, which motivates our use of the term ‘high-frequency homogenization’ when perturbing about these standing waves. The resulting long-wave equations are deduced only explicitly dependent upon the macroscale, with the microscale represented by integral quantities. These equations accurately reproduce the behaviour of the Bloch mode spectrum near the edges of the Brillouin zone, hence yielding an explicit way for homogenizing periodic media in the vicinity of ‘cell resonances’. The similarity of such model equations to high-frequency long wavelength asymptotics, for homogeneous acoustic and elastic waveguides, valid in the vicinities of thickness resonances is emphasized. Several illustrative examples are considered and show the efficacy of the developed techniques.NSERC (Canada) and the EPSRC
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