Cross-frontal entrainment of plankton into a buoyant plume: The frog tongue mechanism

A mechanism for the cross-frontal entrainment of plankton by a buoyant plume influenced by wind stress is described and tested using an idealized numerical model. Under the right circumstances, plankton may enter a buoyant plume during an upwelling wind stress, then be transported shoreward during a subsequent downwelling wind stress. In order for the plankton to enter the plume, they must swim upward at a velocity (wp) bounded by Hplume/T \u3c wp \u3c κ/ Hmix where Hplume is the thickness of the buoyant plume, Hmix is the thickness of the upper oceanic mixed layer (Hmix \u3e Hplume), κ is the magnitude of vertical mixing within the mixed layer, and T is the time between upwelling and downwelling events. In words, this equation states that the plankton must swim slow enough so that they are evenly distributed through the mixed layer, so that the buoyant plume may override the plankton patch during upwelling. Once the plume has overridden the patch, in order to enter the plume, the plankton must swim fast enough to be able to enter the plume in the time while it is over them. These two bounds on the swimming rate suggest that, given various physical parameters, there may be a range of swimming speed that will maximize entrainment into a plume. Numerical experiments corroborate the feasibility of the proposed mechanisms and associated scaling

Biological control of the vernal population increase of \u3cem\u3eCalanus finmarchicus\u3c/em\u3e on Georges Bank

An adjoint data assimilation approach was used to quantify the physical and biological controls on Calanus finmarchicus N3–C6 stages on Georges Bank and its nearby environs. The mean seasonal cycle of vertically averaged distributions, from 5 years of the GLOBEC Georges Bank Broad-Scale Surveys between January and June, was assimilated into a physical–biological model based on the climatological circulation. Large seasonal and spatial variability is present in the inferred supply sources, mortality rates, computed molting fluxes, and physical transports. Estimated mortalities fall within the range of observed rates, and exhibit stage structure that is consistent with earlier findings. Inferred off-bank initial conditions indicate that the deep basins in the Gulf of Maine are source regions of early stage nauplii and late-stage copepodids in January. However, the population increase on Georges Bank from January to April is controlled mostly by local biological processes. Magnitudes of the physical transport terms are nearly as large as the mortality and molting fluxes, but their bank-wide averages are small in comparison to the biological terms. The hypothesis of local biological control is tested in a sensitivity experiment in which upstream sources are set to zero. In that solution, the lack of upstream sources is compensated by a decrease in mortality that is much smaller than the uncertainty in observational estimates

Distributions, Sources, and Transformations of Dissolved and Particulate Iron on the Ross Sea Continental Shelf During Summer

We report water column dissolved iron (dFe) and particulate iron (pFe) concentrations from 50 stations sampled across the Ross Sea during austral summer (January-February) of 2012. Concentrations of dFe and pFe were measured in each of the major Ross Sea water masses, including the Ice Shelf Water and off-shelf Circumpolar Deep Water. Despite significant lateral variations in hydrography, macronutrient depletion, and primary productivity across several different regions on the continental shelf, dFe concentrations were consistently low (\u3c0.1 nM) in surface waters, with only a handful of stations showing elevated concentrations (0.20-0.45 nM) in areas of melting sea ice and near the Franklin Island platform. Across the study region, pFe associated with suspended biogenic material approximately doubled the inventory of bioavailable iron in surface waters. Our data reveal that the majority of the summertime iron inventory in the Ross Sea resides in dense shelf waters, with highest concentrations within 50 m of the seafloor. Higher dFe concentrations near the seafloor are accompanied by an increased contribution to pFe from authigenic and/or scavenged iron. Particulate manganese is also influenced by sediment resuspension near the seafloor but, unlike pFe, is increasingly associated with authigenic material higher in the water column. Together, these results suggest that following depletion of the dFe derived from wintertime convective mixing and sea ice melt, recycling of pFe in the upper water column plays an important role in sustaining the summertime phytoplankton bloom in the Ross Sea polynya

Advancing science from plankton to whales—Celebrating the contributions of James J. McCarthy

Hailing from Sweet Home, Oregon, where his father introduced him to the fascinations of pondwater (McCarthy 2018), Jim McCarthy graduated from Gonzaga University, and in the late 1960s joined the Food Chain Research Group at the Scripps Institution of Oceanography, where he received his doctorate in 1971. The Food Chain Research Group, which was becoming recognized as the premier research group on plankton, was at that time directed by such distinguished scientists as John Strickland and Dick Eppley, among others. The goal of the Food Chain Group was to understand plankton dynamics and trophodynamics, “to a degree that will enable man to exercise satisfactory control of the environment and make useful predictions” (Institute of Marine Resources annual report, 1968, cited in Shor 1978:143) and “to predict the formation and transfer of nutrients through the full cycle of life in the ocean” (Shor 1978:140). It was there that Jim became immersed in all aspects of nutrients, plankton, and the marine food web

The ecological and biogeochemical state of the North Pacifi c Subtropical Gyre is linked to sea surface height

Sea surface height (SSH) is routinely measured from satellites and used to infer ocean currents, including eddies, that affect the distribution of organisms and substances in the ocean. SSH not only reflects the dynamics of the surface layer, but also is sensitive to the fluctuations of the main pycnocline; thus it is linked to events of nutrient upwelling. Beyond episodic upwelling events, it is not clear if and how SSH is linked to broader changes in the biogeochemical state of marine ecosystems. Our analysis of 23 years of satellite observations and biogeochemical measurements from the North Pacific Subtropical Gyre shows that SSH is associated with numerous biogeochemical changes in distinct layers of the water column. From the sea surface to the depth of the chlorophyll maximum, dissolved phosphorus and nitrogen enigmatically increase with SSH, enhancing the abundance of heterotrophic picoplankton. At the deep chlorophyll maximum, increases in SSH are associated with decreases in vertical gradients of inorganic nutrients, decreases in the abundance of eukaryotic phytoplankton, and increases in the abundance of prokaryotic phytoplankton. In waters below ∼100 m depth, increases in SSH are associated with increases in organic matter and decreases in inorganic nutrients, consistent with predicted consequences of the vertical displacement of isopycnal layers. Our analysis highlights how satellite measurements of SSH can be used to infer the ecological and biogeochemical state of open-ocean ecosystems

Diatom Hotspots Driven by Western Boundary Current Instability

Abstract Climatic changes have decreased the stability of the Gulf Stream (GS), increasing the frequency at which its meanders interact with the Mid-Atlantic Bight (MAB) continental shelf and slope region. These intrusions are thought to suppress biological productivity by transporting low-nutrient water to the otherwise productive shelf edge region. Here we present evidence of widespread, anomalously intense subsurface diatom hotspots in the MAB slope sea that likely resulted from a GS intrusion in July 2019. The hotspots (at ∼50 m) were associated with water mass properties characteristic of GS water (∼100 m); it is probable that the hotspots resulted from the upwelling of GS water during its transport into the slope sea, likely by a GS meander directly intruding onto the continental slope east of where the hotspots were observed. Further work is required to unravel how increasingly frequent direct GS intrusions could influence MAB marine ecosystems

Environmental controls, oceanography and population dynamics of pathogens and harmful algal blooms: connecting sources to human exposure

© 2008 Author et al. This is an open access article distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Environmental Health 7 (2008): S5, doi:10.1186/1476-069X-7-S2-S5.Coupled physical-biological models are capable of linking the complex interactions between environmental factors and physical hydrodynamics to simulate the growth, toxicity and transport of infectious pathogens and harmful algal blooms (HABs). Such simulations can be used to assess and predict the impact of pathogens and HABs on human health. Given the widespread and increasing reliance of coastal communities on aquatic systems for drinking water, seafood and recreation, such predictions are critical for making informed resource management decisions. Here we identify three challenges to making this connection between pathogens/HABs and human health: predicting concentrations and toxicity; identifying the spatial and temporal scales of population and ecosystem interactions; and applying the understanding of population dynamics of pathogens/HABs to management strategies. We elaborate on the need to meet each of these challenges, describe how modeling approaches can be used and discuss strategies for moving forward in addressing these challenges.The authors acknowledge the financial support for the NSF/NIEHS and NOAA Centers for Oceans and Human Healt

Biogeochemical impacts due to mesoscale eddy activity in the Sargasso Sea as measured at the Bermuda Atlantic Time-series Study (BATS), Deep-Sea Res.

Abstract A comparison of monthly biogeochemical measurements made from 1993 to 1995, combined with hydrography and satellite altimetry, was used to assess the impacts of nine eddy events on primary productivity and particle flux in the Sargasso Sea. Measurements of primary production, thorium-234 flux, nitrate+nitrite, and photosynthetic pigments made at the US JGOFS Bermuda Atlantic Time-series Study (BATS) site were used. During the three years of this study, four out of six high thorium-234 flux events occurred during the passage of an eddy. Primary production nearly as high as the spring bloom maximum was observed in two modewater eddies (May 1993 and July 1995). The 1994 spring bloom at BATS was suppressed by the passage of an anticyclone. Distinct phytoplankton community shifts were observed in modewater eddies, which had an increased percentage of diatoms and dinoflagellates, and in cyclones, which had an increased percentage of Synechococcus. These variations in species composition within mode-water eddies and cyclones may be associated with the ages of the sampled eddies, and/or differences in physical, chemical, and biological factors in these two distinct eddy types. In general, eddies that were one to two months old elicited a large biological response; eddies that were three months old may show a biological response and were accompanied by high thorium flux; eddies that were four months old or older did not show a biological response or high thorium flux. A conceptual model depicting temporal changes during eddy upwelling, maturation, and decay can explain the observations in all seven upwelling eddies present in the time-series investigated herein

GEOHAB modelling: Linking Observations to Predictions: A Workshop Report

Global Ecology and Oceanography of Harmful Algal Blooms (GEOHAB) Modelling Workshop, Linking Linking Observations to Observations to Predictions Predictions, June 2009, Galway, Ireland.-- 85 pagesNow is an historic time in the field of harmful algal bloom (HAB) science. HAB problems are growing worldwide, and society’s need for understanding these phenomena is more pressing than ever. Technological advances have expanded our capabilities for observing the ocean, providing unprecedented opportunities not only for the detection of blooms, but also for observing with more accuracy the physical, chemical, and biological factors that trigger their initiation, development, and ultimate demise. However, despite these rapidly expanding observational capabilities, HAB processes will continue to be undersampled for the foreseeable future, owing to the wide range of space and time scales relevant to these oceanographic phenomena. As such, we must rely on models to help interpret our necessarily sparse observations. Such models can take many forms, ranging from conceptual models, to simple analytic formulae, or to complex numerical models that assimilate data (Franks 1997). Of course, the topic of HAB modelling is embedded within, and benefits from, the accomplishments of the broader field of physicalbiological interactions generally (Franks 1995, Hofmann and Friedrichs 2002, Blackford et al. 2007, Lynch et al. 2009)Support for the workshop on which this volume is based was provided by the Scientific Committee on Oceanic Research (SCOR) and the Intergovernmental Oceanographic Commission (IOC) of UNESCO, the U.S. National Science Foundation and National Oceanic and Atmospheric Administration, the National University of Ireland Galway, the environmental Protection Agency (Ireland), the Irish Marine Institute, Udaras na Gaeltachta, and the Centre Nationale D’Etudes Spatiales.Peer reviewe

Impact of Near‐Inertial Waves on Vertical Mixing and Air‐Sea CO2 Fluxes in the Southern Ocean

We report the significant impact of near-inertial waves (NIWs) on vertical mixing and air-sea carbon dioxide (CO2) fluxes in the Southern Ocean using a biogeochemical model coupled to an eddy-rich ocean circulation model. The effects of high-frequency processes are quantified by comparing the fully coupled solution (ONLINE) to two offline simulations based on 5-day-averaged output of the ONLINE simulation: one that uses vertical mixing archived from the ONLINE model (CTRL) and another in which vertical mixing is recomputed from the 5-day average hydrodynamic fields (5dAVG). In this latter simulation, processes with temporal variabilities of a few days including NIWs are excluded in the biogeochemical simulation. Suppression of these processes reduces vertical shear and vertical mixing in the upper ocean, leading to decreased supply of carbon-rich water from below, less CO2 outgassing in austral winter, and more uptake in summer. The net change amounts up to one third of the seasonal variability in Southern Ocean CO2 flux. Our results clearly demonstrate the importance of resolving high-frequency processes such as NIWs to better estimate the carbon cycle in numerical model simulations. ©2019. American Geophysical Union. All Rights Reserved.NSF MOBY project (OCE-1048926)NSF MOBY project (OCE-1048897)National Research Foundation of Korea (NRF) (grant no. NRF-2019R1C1C1003663)Yonsei University Research Fund (2018-22-0053