460 research outputs found
Nonlinear shallow water tropical instability waves on the equatorial β ‐plane: Genesis of two distinct types of waves
Peer Reviewedhttp://deepblue.lib.umich.edu/bitstream/2027.42/95089/1/grl26480.pd
Impacts of regional mixing on the temperature structure of the equatorial Pacific Ocean. Part 1: Vertically uniform vertical diffusion
AbstractWe investigate the sensitivity of numerical-model solutions to regional changes in vertical diffusion. Specifically, we vary the background diffusion coefficient, κb, within spatially distinct subregions of the tropical Pacific, assess the impacts of those changes, and diagnose the processes that account for them.Solutions respond to a diffusion anomaly, δκb, in three ways. Initially, there is a fast response (several months), due to the interaction of rapidly-propagating, barotropic and gravity waves with eddies and other mesoscale features. It is followed by a local response (roughly one year), the initial growth and spatial pattern of which can be explained by one-dimensional (vertical) diffusion. At this stage, temperature and salinity anomalies are generated that are either associated with a change in density (“dynamical” anomalies) or without one (“spiciness” anomalies). In a final adjustment stage, the dynamical and spiciness anomalies spread to remote regions by radiation of Rossby and Kelvin waves and by advection, respectively.In near-equilibrium solutions, dynamical anomalies are generally much larger in the latitude band of the forcing, but the impact of off-equatorial forcing by δκb on the equatorial temperature structure is still significant. Spiciness anomalies spread equatorward within the pycnocline, where they are carried to the equator as part of the subsurface branch of the Pacific Subtropical Cells, and spiciness also extends to the equator via western-boundary currents. Forcing near and at the equator generates strong dynamical anomalies, and sometimes additional spiciness anomalies, at pycnocline depths. The total response of the equatorial temperature structure to δκb in various regions depends on the strength and spatial pattern of the generation of each signal within the forcing region as well as on the processes of its spreading to the equator
Heat content of the Arabian Sea Mini Warm Pool is increasing
© The Author(s), 2015. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Atmospheric Science Letters 17 (2016): 39-42, doi:10.1002/asl.596.Sea surface temperature in the Arabian Sea Mini Warm Pool has been suggested to be one of the factors that affects the Indian summer monsoon. In this paper, we analyze the annual ocean heat content (OHC) of this region during 1993–2010, using in situ data, satellite observations, and a model simulation. We find that OHC increases significantly in the region during this period relative to the north Indian Ocean, and propose that this increase could have caused the decrease in Indian Summer Monsoon Rainfall that occurred at the same time
Development and Validation of a Targeted Next-Generation Sequencing Gene Panel for Children With Neuroinflammation
Importance Neuroinflammatory disorders are a range of severe neurological disorders causing brain and spinal inflammation and are now increasingly recognized in the pediatric population. They are often characterized by marked genotypic and phenotypic heterogeneity, complicating diagnostic work in clinical practice and molecular diagnosis.
Objective To develop and evaluate a next-generation sequencing panel targeting genes causing neuroinflammation or mimicking neuroinflammation.
Design, Setting, and Participants Cohort study in which a total of 257 genes associated with monogenic neuroinflammation and/or cerebral vasculopathy, including monogenic noninflammatory diseases mimicking these entities, were selected. A customized enrichment capture array, the neuroinflammation gene panel (NIP), was created. Targeted high-coverage sequencing was applied to DNA samples taken from eligible patients referred to Great Ormond Street Hospital in London, United Kingdom, between January 1, 2017, and January 30, 2019, because of onset of disease early in life, family history, and/or complex neuroinflammatory phenotypes.
Main Outcomes and Measures The main outcome was the percentage of individuals with definitive molecular diagnoses, variant classification, and clinical phenotyping of patients with pathogenic variants identified using the NIP panel. The NIP panel was initially validated in 16 patients with known genetic diagnoses.
Results The NIP was both sensitive (95%) and specific (100%) for detection of known mutations, including gene deletions, copy number variants, small insertions and deletions, and somatic mosaicism with allele fraction as low as 3%. Prospective testing of 60 patients (30 [50%] male; median [range] age, 9.8 [0.8-20] years) presenting with heterogeneous neuroinflammatory phenotypes revealed at least 1 class 5 (clearly pathogenic) variant in 9 of 60 patients (15%); 18 of 60 patients (30%) had at least 1 class 4 (likely pathogenic) variant. Overall, a definitive molecular diagnosis was established in 12 of 60 patients (20%).
Conclusions and Relevance The NIP was associated with molecular diagnosis in this cohort and complemented routine laboratory and radiological workup of patients with neuroinflammation. Unexpected genotype-phenotype associations in patients with pathogenic variants deviating from the classic phenotype were identified. Obtaining an accurate molecular diagnosis in a timely fashion informed patient management, including successful targeted treatment in some instances and early institution of hematopoietic stem cell transplantation in other
Spin Relaxation in Single Layer Graphene with Tunable Mobility
Graphene is an attractive material for spintronics due to theoretical
predictions of long spin lifetimes arising from low spin-orbit and hyperfine
couplings. In experiments, however, spin lifetimes in single layer graphene
(SLG) measured via Hanle effects are much shorter than expected theoretically.
Thus, the origin of spin relaxation in SLG is a major issue for graphene
spintronics. Despite extensive theoretical and experimental work addressing
this question, there is still little clarity on the microscopic origin of spin
relaxation. By using organic ligand-bound nanoparticles as charge reservoirs to
tune mobility between 2700 and 12000 cm2/Vs, we successfully isolate the effect
of charged impurity scattering on spin relaxation in SLG. Our results
demonstrate that while charged impurities can greatly affect mobility, the spin
lifetimes are not affected by charged impurity scattering.Comment: 13 pages, 5 figure
Precision Electron-Beam Polarimetry using Compton Scattering at 1 GeV
We report on the highest precision yet achieved in the measurement of the
polarization of a low energy, (1 GeV), electron beam, accomplished
using a new polarimeter based on electron-photon scattering, in Hall~C at
Jefferson Lab. A number of technical innovations were necessary, including a
novel method for precise control of the laser polarization in a cavity and a
novel diamond micro-strip detector which was able to capture most of the
spectrum of scattered electrons. The data analysis technique exploited track
finding, the high granularity of the detector and its large acceptance. The
polarization of the A, ~GeV electron beam was measured with a
statistical precision of ~1\% per hour and a systematic uncertainty of
0.59\%. This exceeds the level of precision required by the \qweak experiment,
a measurement of the vector weak charge of the proton. Proposed future
low-energy experiments require polarization uncertainty ~0.4\%, and this
result represents an important demonstration of that possibility. This
measurement is also the first use of diamond detectors for particle tracking in
an experiment.Comment: 9 pages, 7 figures, published in PR
The Physics of Kondo Impurities in Graphene
This article summarizes our understanding of the Kondo effect in graphene,
primarily from a theoretical perspective. We shall describe different ways to
create magnetic moments in graphene, either by adatom deposition or via
defects. For dilute moments, the theoretical description is in terms of
effective Anderson or Kondo impurity models coupled to graphene's Dirac
electrons. We shall discuss in detail the physics of these models, including
their quantum phase transitions and the effect of carrier doping, and confront
this with existing experimental data. Finally, we point out connections to
other quantum impurity problems, e.g., in unconventional superconductors,
topological insulators, and quantum spin liquids.Comment: 27 pages, 8 figs. Review article prepared for Rep. Prog. Phys. ("key
issues" section). (v2) Final version as publishe
Measurement of the Neutron Radius of 208Pb Through Parity-Violation in Electron Scattering
We report the first measurement of the parity-violating asymmetry A_PV in the
elastic scattering of polarized electrons from 208Pb. A_PV is sensitive to the
radius of the neutron distribution (Rn). The result A_PV = 0.656 \pm 0.060
(stat) \pm 0.014 (syst) ppm corresponds to a difference between the radii of
the neutron and proton distributions Rn - Rp = 0.33 +0.16 -0.18 fm and provides
the first electroweak observation of the neutron skin which is expected in a
heavy, neutron-rich nucleus.Comment: 6 pages, 1 figur
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